FC931743

Overview
NameFC931743
Unique NameFC931743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20
Identity = 56/175 (32.00%), Postives = 102/175 (58.29%), Query Frame = 1
Query:  232 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMY---------LGARFGAKRTSLKSKRSDRYLPRVGEA-----LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGI-NKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 711
            K+ ++Y  + E+ ++++ FK N   I +HN  N+ YK+ +N+F+D + +++ S +         L  ++    +S+ + +    +     A     +P+ +D+R+KG V E KDQG CGSCWAF+++  VE +  K    ++++LSEQE+VDC +  N GC+GG   Y+F + I+
Sbjct:  243 KYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC-SKLNFGCDGGHPFYSFIYAIE 416          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 1
Query:  478 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 705
            +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVD      N+GCNGGLMD AF++I
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYI 77          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 56/158 (35.44%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  208 GMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFG-AKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 678
            G+   W   H +   AL E   R        R+++    EN T   G+N+F+ L  EE++++YLG+++  A R   + +R    +P V  +LP   DWR K  V  V++Q  CG CWAFS ++A+E    I   SL  LS Q+++DC  + N GC GG
Sbjct:   20 GVAGTWSWSHQREAAALRESLHRH-------RYLNSFPHENSTAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP---IPNV--SLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN-NSGCLGG 164          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 44/78 (56.41%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  475 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 708
            A+P S+DWR  GAV  VK+Q  CG+CWAF+ IA VE I KI  G L  LSEQ+++DC   Y  GC GG    AFEFII
Sbjct:    1 AVPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDCAKGY--GCKGGWEFRAFEFII 76          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16
Identity = 54/173 (31.21%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  199 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 711
            E+  +F+ + ++  ++Y    E  +R  IF  NL        E+  T + G   F+DLT EE+  +Y G     +RT   +K+ +      GE++P + DWRK K  ++ VK+QGSC  CWA +    ++ + +I     + +S QEL+DC+   N GCNGG +  A+  +++
Sbjct:   35 ELKEVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLY-GQERSPERTPNMTKKVESNT--WGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGN-GCNGGFVWDAYLTVLN 203          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 62/194 (31.96%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  172 KSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSMY---LGARFGAKR---TSLKSKRSDRYLPRV---GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSL-ISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 711
            K  S + + +    F  +  ++ K Y  + E+ +RFE FK       +HN        TY   +N+++D + EE+ + +   L      K      LK   ++  L  V    +  PDS D+R K      KDQG+CGSCWAF+ I   E +       + IS SEQ++VDC T  N GC+GG   YAF ++I+
Sbjct:  148 KLESMQDNIKYASKFFKYMKENNKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE-NYGCDGGNPFYAFLYMIN 340          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 57/188 (30.32%), Postives = 95/188 (50.53%), Query Frame = 1
Query:  178 SSWRTDD------EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYL--PRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 711
            SS R+ D      E+   F  + +++ ++Y+   E  +R +IF  NL    +   E+  T + G+  F+DLT EE+  +Y     G +R   ++ +  R +     GE++P + DWRK  G ++ VK Q SC  CWA +    +E +  I     + LS QEL+DC     +GC GG +  AF  +++
Sbjct:   24 SSLRSQDPGPQPLELKQAFTLFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEFGRLY-----GHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDCGRC-GDGCRGGFVWDAFITVLN 205          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  265 KEKRFEIFKDNL---RFIDE-HNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGG 678
            +E+    F+++L   R+++    SEN T   G+N+F+ L  EE++++YL ++    +    S      +P V  +LP   DWR K  V +V++Q  CG CWAFS + AVE    I    L  LS Q+++DC  SYN  GCNGG
Sbjct:   37 REREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSK--PSKFPRYSAEVHMSIPNV--SLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDC--SYNNYGCNGG 173          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP3_CARCN (Cysteine proteinase 3 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 1
Query:  481 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 606
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTIA VEGINKIV G
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIATVEGINKIVHG 43          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 1
Query:  199 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRK-KGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 711
            E+   F+ + ++  ++Y +  E   R +IF  NL        E+  T + G+  F+DLT EE+  +Y G R  A       +      P   E++P S DWRK   A++ +KDQ +C  CWA +    +E + +I     + +S QEL+DC     +GC+GG +  AF  +++
Sbjct:   37 ELKEAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLY-GYRRAAGGVPSMGREIRSEEPE--ESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRC-GDGCHGGFVWDAFITVLN 205          
The following BLAST results are available for this feature:
BLAST of FC931743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP_PLAVS2.696e-2032.00Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CATL1_SHEEP3.892e-1961.04Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATO_MOUSE4.758e-1735.44Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
BROM2_ANACO4.758e-1756.41Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATW_MOUSE3.084e-1631.21Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CYSP_PLAVN8.973e-1631.96Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CATW_FELCA1.999e-1530.32Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATO_HUMAN2.611e-1537.06Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CYSP3_CARCN2.210e-1483.33Cysteine proteinase 3 (Fragment) OS=Carica candama... [more]
CATW_HUMAN3.770e-1430.06Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34108E03EF PostHarvP1 Citrus clementina cDNA clone C34108E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931743 ID=FC931743; Name=FC931743; organism=Citrus clementina; type=EST; length=715bp
GACTCTGCCTCATAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCT
CTTTTCTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGCTTT
TACTTTTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCT
TATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGA
GGTTATGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATA
ACGCTTTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTT
AGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTT
GAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGG
GTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGAT
CGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAG
GAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTT
GCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTT
ACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATAC
ATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGT
TCATTATTGATATGG
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