FC931743

Overview
NameFC931743
Unique NameFC931743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:24..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   97 LLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 678
            + LF++   S  D SIV Y +   + +      + ++ +FE+W +KH K Y  + EK  RFEIFKDNL++IDE N +N +Y +GLN FAD++N+E++  Y G+  G   T+  S   +  L      +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+DCD   + GCNGG
Sbjct:   15 ICLFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSY--EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGG 199          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40
Identity = 98/220 (44.55%), Postives = 126/220 (57.27%), Query Frame = 1
Query:   49 LFSPKMGLFRSPTMAMLLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            L S K+ L  S   A+L +    + SA+ M     DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I
Sbjct:    3 LLSKKL-LVASMVAAVLAVAAVELCSAIPME----DKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYI 209          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40
Identity = 98/220 (44.55%), Postives = 125/220 (56.82%), Query Frame = 1
Query:   49 LFSPKMGLFRSPTMAMLLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            L S K+ L  S   A+L +    + SA+ M     DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I
Sbjct:    3 LLSKKL-LVASMVAAVLAVAAVELCSAIPME----DKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYI 209          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40
Identity = 88/203 (43.35%), Postives = 121/203 (59.61%), Query Frame = 1
Query:   97 LLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            + LF     S  D SIV Y +   + +      + ++ +F +W +KH K Y  + EK  RFEIFKDNL++IDE N     Y +GLN F+DL+N+E++  Y+G+              + ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++
Sbjct:   15 ICLFGHMSLSYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYV 207          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.744e-38
Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 1
Query:  430 LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 708
            L   +SDRYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVI 94          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.977e-36
Identity = 85/208 (40.87%), Postives = 121/208 (58.17%), Query Frame = 1
Query:   94 MLLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 708
            ++ LFLF  +     S  S D+ +          D +M  FE W  ++G+ Y    EK +RF+IFK+N++ I+  NS N  +Y +G+N+F D+T  E+ + Y G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII
Sbjct:    7 LVFLFLFLCAMWASPSAASRDEPN----------DPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFII 197          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.966e-35
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID 711
            F  W + H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ YLG +F A  +SL   + ++       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIIN 188          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.874e-35
Identity = 87/208 (41.83%), Postives = 116/208 (55.77%), Query Frame = 1
Query:   88 MAMLLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 708
            M + +  +FT+   L +S +S       K        +    F  W   + KAY    E   R+E FK N+ ++   NS+     +GLN+ ADL+NEEYR  YLG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II
Sbjct:    1 MRLSITLIFTLI-VLSISFISAGNVFSHK--------QYQDSFIDWMRSNNKAYTHK-EFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYII 198          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.609e-35
Identity = 81/173 (46.82%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIID 711
            ++ W   H K Y    E+E R  I++ NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IID
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIID 203          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34
Identity = 76/181 (41.99%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  169 SKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 708
            S +S     D +M  FE W  ++G+ Y    EK  RF+IFK+N+  I+  N+ N  +Y +G+N+F D+TN E+ + Y G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFII 197          
The following BLAST results are available for this feature:
BLAST of FC931743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PAPA1_CARPA2.770e-4145.88Papain OS=Carica papaya PE=1 SV=1[more]
CYSP2_HORVU1.053e-4044.55Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU1.375e-4044.55Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
PAPA4_CARPA2.345e-4043.35Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSPL_SOLLC3.744e-3875.27Low-temperature-induced cysteine proteinase (Fragm... [more]
BROM1_ANACO5.977e-3640.87Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP5_DICDI2.966e-3546.39Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP3_DICDI3.874e-3541.83Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATS_MOUSE6.609e-3546.82Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
ANAN_ANACO1.127e-3441.99Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34108E03EF PostHarvP1 Citrus clementina cDNA clone C34108E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931743 ID=FC931743; Name=FC931743; organism=Citrus clementina; type=EST; length=715bp
GACTCTGCCTCATAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCT
CTTTTCTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGCTTT
TACTTTTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCT
TATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGA
GGTTATGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATA
ACGCTTTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTT
AGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTT
GAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGG
GTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGAT
CGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAG
GAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTT
GCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTT
ACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATAC
ATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGT
TCATTATTGATATGG
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