FC931743

Overview
NameFC931743
Unique NameFC931743
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:24..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 61/175 (34.86%), Postives = 104/175 (59.43%), Query Frame = 1
Query:  193 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDM 714
            +++   +F+ +  ++ K Y++  E ++RF  FK   + I  HN++  +YK+G+N +ADL+N+E+ ++          T   S   D  L     ++P +VDWR +  V  VKDQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG    AF++++++
Sbjct:  218 EEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESL----RSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEI 388          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  223 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIID 711
            W   H + Y  + E+  R  +++ N++ I+ HN E      ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYAF+++ D
Sbjct:   32 WKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVAD 192          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 73/169 (43.20%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            +E W   + K YN+ G++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +  A R    S+ +D  Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASR----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYV 189          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29
Identity = 71/173 (41.04%), Postives = 96/173 (55.49%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFI 705
            F ++  + GK+Y    E   R  +FKDNLR    H   + + + G+ +F+DLT  E+R  YLG R   +    +   S    P +  + LPD  DWR  GAV  VK+QGSCGSCW+FS   A+EG + + TG L  LSEQ+ VDCD         S + GCNGGLM  AF ++
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYL 220          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29
Identity = 73/157 (46.50%), Postives = 91/157 (57.96%), Query Frame = 1
Query:  262 EKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIID 711
            E++ R  I++ NL+FI  HN E+     +Y VG+N   D+T EE          G+ R      RS        + LPDSVDWR+KG V  VK QGSCGSCWAFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M  AF++IID
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGY-----MGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIID 193          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29
Identity = 68/167 (40.72%), Postives = 100/167 (59.88%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFII 708
            F++W  +H K Y+++ E   R ++F +N R I  HN  N T+K+ LN+F+D++  E +  +L +          S     YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AFE+I+
Sbjct:   33 FKSWMKQHQKTYSSV-EYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYIL 192          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.207e-28
Identity = 71/168 (42.26%), Postives = 95/168 (56.55%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            +E W   HGK YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSF---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYV 189          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.577e-28
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            +E W   H K YN   ++  R  I++ NL++I  HN E      TY++ +N   D+T+EE      G +       L   RS+   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++
Sbjct:   26 WELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLK-----VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYV 189          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28
Identity = 70/168 (41.67%), Postives = 94/168 (55.95%), Query Frame = 1
Query:  214 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 705
            +E W   H K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+++
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYV 189          
BLAST of FC931743 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27
Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = 1
Query:  211 MFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV-----GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 705
            ++  W   + K YN   ++ +R  I++ N++ I EHN  +     TY +GLN+F D+T EE+++ YL         +  S+ SD     V       A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A++++
Sbjct:   20 LWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYL---------TEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYL 184          
The following BLAST results are available for this feature:
BLAST of FC931743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CFAD_DICDI1.426e-2934.86Counting factor associated protein D OS=Dictyostel... [more]
CATL1_CERAE1.426e-2941.07Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATK_BOVIN1.426e-2943.20Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CYSP1_MAIZE2.432e-2941.04Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATS_RAT7.077e-2946.50Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATH_MOUSE7.077e-2940.72Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATK_RAT1.207e-2842.26Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_HUMAN1.577e-2842.35Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATK_MOUSE5.991e-2841.67Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATLL_FASHE1.335e-2739.43Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]

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Properties
Property NameValue
Genbank descriptionC34108E03EF PostHarvP1 Citrus clementina cDNA clone C34108E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931743 ID=FC931743; Name=FC931743; organism=Citrus clementina; type=EST; length=715bp
GACTCTGCCTCATAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCT
CTTTTCTCCAAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGCTTT
TACTTTTTCTCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCT
TATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGA
GGTTATGGGTATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATA
ACGCTTTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTT
AGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTT
GAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGG
GTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGAT
CGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAG
GAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTT
GCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTT
ACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATAC
ATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGT
TCATTATTGATATGG
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