FC931753

Overview
NameFC931753
Unique NameFC931753
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:5..629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.286e-70
Identity = 131/169 (77.51%), Postives = 145/169 (85.80%), Query Frame = 3
Query:  117 GEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            G+GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR++ D +VQ DMK WPF+V+     KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  ++ AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:    3 GKGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVV-NEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.286e-70
Identity = 134/168 (79.76%), Postives = 147/168 (87.50%), Query Frame = 3
Query:  120 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+VI     KP + V+YKGE+K F  EEISSMVL KM+E AEA+LG T+ NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    5 KGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEGGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.286e-70
Identity = 134/168 (79.76%), Postives = 147/168 (87.50%), Query Frame = 3
Query:  120 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+VI     KP + V+YKGE+K F  EEISSMVL KM+E AEA+LG T+ NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    5 KGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEGGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 265.774 bits (678), Expect = 1.286e-70
Identity = 133/165 (80.61%), Postives = 144/165 (87.27%), Query Frame = 3
Query:  129 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DA VQ DMK WPF+V+    DKP + VNYKGE + F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVV-NDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 169          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.286e-70
Identity = 133/165 (80.61%), Postives = 144/165 (87.27%), Query Frame = 3
Query:  129 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DA VQ DMK WPF+V+    DKP + VNYKGE + F  EEISSMVL KM+EIAEAYLG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVV-NDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 169          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.680e-70
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 3
Query:  123 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNT+FD KRLIGR+F DA+VQ DMK WPF+V++    KP + V YKGE K F  EEISSMVL KM+EIAEAYLG  +++AV+TVPAYFNDSQRQATKDAG I GLNV
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDRKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNV 170          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.194e-70
Identity = 134/168 (79.76%), Postives = 148/168 (88.10%), Query Frame = 3
Query:  120 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+VI   A KP + V+YKGE+K F  EEISSMVL KM+E AEA+LG ++ NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEAGKPKVLVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHSVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 265.003 bits (676), Expect = 2.194e-70
Identity = 134/168 (79.76%), Postives = 147/168 (87.50%), Query Frame = 3
Query:  120 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ DMKLWPF+VI   A KP + V+YKGE+K F  EEISSMVL KM+E AEA+LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVI-NEAGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHNVTNAVITVPAYFNDSQRQATKDAGVIAGLNV 171          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.866e-70
Identity = 129/168 (76.79%), Postives = 147/168 (87.50%), Query Frame = 3
Query:  120 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDT+RLIGDAAKNQVAMNP NT+FDAKRLIGR+F DA+VQ DMK WPF+V++    KP I V YKGE+K F  EE+SSMVL KM+E AEAYLG T++NAV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 169          
BLAST of FC931753 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.866e-70
Identity = 132/168 (78.57%), Postives = 143/168 (85.12%), Query Frame = 3
Query:  120 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 623
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQ DM  WPF VI     +P + V YKGE K F  EE+SSMVL KM+EIAEAYLG T+ NAV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDHVVQSDMNDWPFNVI-NDNTRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVNNAVITVPAYFNDSQRQATKDAGTISGLNV 169          
The following BLAST results are available for this feature:
BLAST of FC931753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_CHICK1.286e-7077.51Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HS71L_PIG1.286e-7079.76Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN1.286e-7079.76Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HS71B_MOUSE1.286e-7080.61Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE1.286e-7080.61Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP72_MOUSE1.680e-7078.44Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HS71L_RAT2.194e-7079.76Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_MOUSE2.194e-7079.76Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP7D_MANSE2.866e-7076.79Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP7C_ORYLA2.866e-7078.57Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]

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Properties
Property NameValue
Genbank descriptionC34108F01EF PostHarvP1 Citrus clementina cDNA clone C34108F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931753 ID=FC931753; Name=FC931753; organism=Citrus clementina; type=EST; length=625bp
ACACATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTTTTTC
TTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAGTTTT
GATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTGGGGA
CGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGATTATC
GCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCACCGA
CACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATGAACC
CCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGATTCAGC
GATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGATTGC
TGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGA
AGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGT
GAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGTTAC
TGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCCG
GTGTCATTGCTGGGCTTAATGTGAT
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