FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 93/206 (45.15%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   E+  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVFIMD  +E +P YL F+KG+VDS DL LN+SRE LQ++ ++  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  +L DY  RMKE +
Sbjct:  229 EWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLSWSHNKVEGKLEYTSLLYVPGRAPFDLYH-REAPRGLKLYVQRVFIMDQADEFLPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKNEPEQYKTFWKNFGQVLKEGPAEDFGNKEKIAGLLRFASTGGDSGEQSVALADYIGRMKEGQ 433          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 92/206 (44.66%), Postives = 138/206 (66.99%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLXDYATRMKEAR 694
            EW  VNK   +W     +IT++EY  FYK + +D+E+ +   H  +EG++E+  +L++P RAPFDL+D R +   +KL+VRRVFIMD  EEL+P YL FV+G++DS DLPLN+SRE LQQN+ ++ I+K LV K + + +E+ +N  E Y  F++ F   LK G+ ED  NK ++A+L R+ +T  G+ +   +L DY  RMKE +
Sbjct:  236 EWETVNKASALWTLSKNDITEDEYKEFYKHVGHDFEDPMEWVHARMEGRMEYTLLLYIPGRAPFDLWD-RDRRGGLKLFVRRVFIMDTSEELLPRYLRFVRGVIDSADLPLNVSREILQQNRQVEAIKKGLVHKVLGMLEEMLKNDPEKYATFWKEFGMVLKEGMIEDFANKERIAKLCRFSTTHDGERVPKIALADYVERMKEGQ 440          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HAES2 (Chaperone protein htpG OS=Haemophilus somnus (strain 2336) GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 91/206 (44.17%), Postives = 141/206 (68.45%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            +W  +NK + +W R   EI+ EEY  FYK L++D+ + L   H  VEG  E+ ++L+VP +AP+DLF+ R+  + +KLYV+RVFIMD+ E+ +P YL F++G++DS DLPLN+SRE LQ NK+   +RK L K+ +++ +++A +++E Y +F++ F   LK G  ED  NK  +A+LLR+ S+K  S ++  SL DY  RMKE +
Sbjct:  226 KWEKINKAQALWTRSKGEISDEEYKEFYKHLSHDFADPLLWTHNKVEGNQEYTSLLYVPSKAPWDLFN-REHKHGLKLYVQRVFIMDDAEQFMPNYLRFMRGLIDSNDLPLNVSREILQDNKVTAALRKALTKRSLQMLEKLAKDDEEKYLQFWKEFGLVLKEGPSEDFANKENIAKLLRFASSKNDSSEQTVSLEDYVARMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HAES1 (Chaperone protein htpG OS=Haemophilus somnus (strain 129Pt) GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 91/206 (44.17%), Postives = 141/206 (68.45%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            +W  +NK + +W R   EI+ EEY  FYK L++D+ + L   H  VEG  E+ ++L+VP +AP+DLF+ R+  + +KLYV+RVFIMD+ E+ +P YL F++G++DS DLPLN+SRE LQ NK+   +RK L K+ +++ +++A +++E Y +F++ F   LK G  ED  NK  +A+LLR+ S+K  S ++  SL DY  RMKE +
Sbjct:  226 KWEKINKAQALWTRSKGEISDEEYKEFYKHLSHDFADPLLWTHNKVEGNQEYTSLLYVPSKAPWDLFN-REHKHGLKLYVQRVFIMDDAEQFMPNYLRFMRGLIDSNDLPLNVSREILQDNKVTAALRKALTKRSLQMLEKLAKDDEEKYLQFWKEFGLVLKEGPSEDFANKENIAKLLRFASSKNDSSEQTVSLEDYVARMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 92/206 (44.66%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   EI  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVF+MD  E  +P YL F+KG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + +K G  ED  NK K+A LLR+ ST+   G++  SL DY  R KE +
Sbjct:  229 EWETVNRASALWTRPRTEIKDEEYQEFYKHIAHDFENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQ-REAPKGLKLYVQRVFVMDQAESFLPLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNEPEQYKGFWKNFGQVMKEGPAEDFANKEKIAGLLRFASTQGDDGEQNVSLADYLARAKEGQ 433          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAE-NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLXDYATRMKEAR 694
            +N  K IW R   E+T+EEY  FYK +++D+E      HFS EG  EFKA++++P + PFDLF   +K   ++LYV+RVFI D CEEL+P+YL FVKG+VDS DLPLN+SRE LQ++  +K I+K+LV K +    E+ E N ++Y  F++ F   LK G+H D  NK KL EL  + ST +     TSL +Y  RM EA+
Sbjct:  239 LNSMKAIWARPKSEVTEEEYQEFYKHISHDFENPFNTIHFSAEGISEFKALIYLPAKKPFDLFMADRK-KGLQLYVKRVFITDRCEELLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVGKILSTLAEVKEKNFDEYVNFWKEFGPVLKEGLHFDYANKEKLQELALFESTATEAGSFTSLKEYVERMPEAQ 438          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 92/206 (44.66%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   E+  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVF+MD  E  +P Y+ FVKG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  SL +Y  R KE +
Sbjct:  230 EWETVNRASALWTRPRTEVKDEEYQEFYKHVAHDYENPLSWSHNKVEGKLEYTSLLYVPARAPFDLYQ-REAPRGLKLYVQRVFVMDQAESFLPLYMRFVKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNEPEQYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLAEYLARAKEGQ 434          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_POLNA (Chaperone protein htpG OS=Polaromonas naphthalenivorans (strain CJ2) GN=htpG PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 90/204 (44.12%), Postives = 132/204 (64.71%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R  ++IT E YA FYK ++ D E  LA  H  VEG  E+  +LF+P +AP D+++ R K   +KLYV+RVFIMD+ + L+P YL FVKG+VDS DLPLN+SRE LQ+++ +K IR+   K+ + + +++A N+ E +  FY  F   LK G+ ED  N+ +LA+LLR+ S+ +     S  DY  RMK+ +
Sbjct:  230 EWETVNQAAALWTRPKKDITPEHYAEFYKQISYDSEAPLATTHNRVEGATEYTQLLFIPAKAPMDMYN-RDKAAGVKLYVKRVFIMDDAQALLPTYLRFVKGVVDSSDLPLNVSRELLQESRAVKAIREGCTKRVLSMIEDLANNEPEKFKTFYAEFGAVLKEGLGEDFANRERLAKLLRFASSTTDTTTVSFADYKARMKDGQ 432          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_AGGAC (Chaperone protein htpG OS=Aggregatibacter actinomycetemcomitans GN=htpG PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 91/206 (44.17%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            +W  +NK   +W R   EI+ EEY  FYK L++D+ + L   H  VEG  E+ ++L+VP +AP+DLF+ R+  + +KLYV+RVFIMD+ E+ +P YL F++G++DS DLPLN+SRE LQ NK+   +RK L K+ +++ +++A ++ E Y +F++ F   LK G  ED  NK  +A+LLR+ ST   S ++  SL DY +RMKE +
Sbjct:  226 KWEKINKSDALWTRSKNEISDEEYKEFYKHLSHDFADPLLWAHNKVEGNQEYTSLLYVPSKAPWDLFN-REHKHGLKLYVQRVFIMDDAEQFMPNYLRFMRGLIDSNDLPLNVSREILQDNKVTAALRKALTKRSLQMLEKLAKDDAEKYQQFWKEFGLVLKEGPAEDFANKEAIAKLLRFASTHNDSSEQNVSLEDYVSRMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_RHOSR (Chaperone protein htpG OS=Rhodococcus sp. (strain RHA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 86/200 (43.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            +N  K +W R  ++++++EY  FYK + + W++ L V     EG  EF+A+LF+P  APFDLF  R     ++LYV+RVFIMD+C++L+PEYL FVKG+VD++DL LN+SRE LQQ++ ++ IR+ L KK +   +++  E  +DY  F+  F + +K G+  D+ N+  L  +  + ST S +ELTSL DY  RMK+ +
Sbjct:  239 INSMKALWARSKDDVSEDEYKEFYKHIAHAWDDPLEVIPMKAEGTFEFQALLFIPSHAPFDLF-MRDGKTGVQLYVKRVFIMDDCDQLMPEYLRFVKGVVDAQDLSLNVSREILQQDRQIRAIRRRLTKKVLTTIKDLKTERPDDYRTFWAEFGRAVKEGLMSDTDNRDVLLGISSFASTHSEEELTSLEDYVARMKDGQ 437          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_PSEA72.172e-4645.15Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HTPG_MAGSM2.172e-4644.66Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]
HTPG_HAES22.172e-4644.17Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_HAES12.172e-4644.17Chaperone protein htpG OS=Haemophilus somnus (stra... [more]
HTPG_PSEF53.705e-4644.66Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_PELPD3.705e-4647.76Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_PSE144.839e-4644.66Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_POLNA4.839e-4644.12Chaperone protein htpG OS=Polaromonas naphthaleniv... [more]
HTPG_AGGAC4.839e-4644.17Chaperone protein htpG OS=Aggregatibacter actinomy... [more]
HTPG_RHOSR6.320e-4643.00Chaperone protein htpG OS=Rhodococcus sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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