FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEU2 (Chaperone protein htpG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=htpG PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 92/206 (44.66%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   E+  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVF+MD  E  +P Y+ FVKG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  SL +Y  R KE +
Sbjct:  230 EWETVNRASALWTRPRTEVKDEEYQEFYKHVAHDYENPLSWSHNKVEGKLEYTSLLYVPARAPFDLYQ-REAPRGLKLYVQRVFVMDQAESFLPLYMRFVKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNEPEKYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLAEYLARAKEGQ 434          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA6 (Chaperone protein htpG OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=htpG PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 90/206 (43.69%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLXDYATRMKEAR 694
            +W  VNK   +W R   E++ EEY  FYK +++D+ + L   H  VEG+ E+ ++L++P +APFD+++ R + + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPLN+SRE LQ NKI + IR+   K+ +++ + +A+N  E Y  F+  F   LK G  ED  NK K+A LLR+ ST++  +    SL DY +RMK+ +
Sbjct:  235 KWEAVNKATALWTRDKSEVSDEEYKEFYKHISHDFADPLVWSHNKVEGKTEYNSLLYIPAKAPFDMWN-RDQKHGLKLYVQRVFIMDDAEQFMPTYLRFVKGLLDSNDLPLNVSREILQDNKITQAIRQGCTKRVLQMLERVAKNDSEKYQGFWAEFGNVLKEGPAEDHANKEKVAGLLRFASTENDSDAQNVSLADYVSRMKDGQ 439          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_BORPA (Chaperone protein htpG OS=Bordetella parapertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 91/206 (44.17%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            E   VN+   +W R   +IT E+Y  FYK++++D+++ LA  H  VEG+ E+  +L+VP+ APFDL+D R     +KLYV+RVFIMD+ E+L+P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AENK EDY  F+  F + LK G  ED+ N+ ++A LL + ST  G+  +  S  DY  RMK+ +
Sbjct:  233 ELETVNQANALWTRNKSDITDEQYREFYKTVSHDYDDPLAWTHNRVEGRSEYTQLLYVPRHAPFDLWD-RDARRGVKLYVKRVFIMDDAEQLLPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENKAEDYATFWTEFGQVLKEGTGEDAANRERIARLLCFASTHDGEQAQTVSFADYVGRMKDGQ 437          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPF (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf0-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.408e-45
Identity = 89/206 (43.20%), Postives = 136/206 (66.02%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   E+  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVF+MD  E  +P YL F+KG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + +K G  ED  NK K+A LLR+ ST    G+++  L +Y  R KE +
Sbjct:  229 EWETVNRASALWTRPRTEVKDEEYQEFYKHIAHDFENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQ-REAPKGLKLYVQRVFVMDQAESFLPLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNEPEQYKGFWKNFGQVMKEGPAEDFANKEKIAGLLRFASTNGTDGEQIVGLAEYLARAKEGQ 433          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_AZOSE (Chaperone protein htpG OS=Azoarcus sp. (strain EbN1) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.408e-45
Identity = 96/206 (46.60%), Postives = 135/206 (65.53%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-----AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLXDYATRMKEAR 694
            VN+   +W R   +IT+EEY  FYK + +D++E LA  H  VEG+ E+  +L++P  APFD++D R   + IKLYV+RVFIMD+ E+L+P YL FV+G+VDS DLPLN+SRE LQ++K +  IR    KK + L + +     A ++E Y  F++ F   LK G+ ED  NK K+A LLR+ ST +   DE+ SL DY  RMKE +
Sbjct:  240 VNQANALWTRSRNDITEEEYKGFYKHVGHDFDEPLAWTHARVEGRHEYTQLLYIPSHAPFDMWD-RNARHGIKLYVKRVFIMDDAEKLMPAYLRFVRGVVDSSDLPLNVSREILQESKDIDTIRSGCTKKVLGLLESLATSDEAADREKYATFWKEFGPVLKEGVGEDFANKDKIAGLLRFASTHADTPDEVVSLADYLARMKEGQ 444          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.408e-45
Identity = 95/206 (46.12%), Postives = 135/206 (65.53%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLXDYATRMKEAR 694
            EW  VN+   +W R P+EI  EEY  FYK + +D+E+ L   H  VEG  E+ ++L+VP RAPFDL++ R++ + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPLN+SRE LQ NK+   +RK   K+ + +  ++A ++ E Y KF+  F   LK G  ED  N+ ++A+LLR+ ST    E    SL DY  RMKE +
Sbjct:  234 EWEQVNRATALWTRNPKEIKDEEYQEFYKHVAHDFEDPLLWGHNRVEGAQEYTSLLYVPARAPFDLYN-REQKHGLKLYVQRVFIMDDAEQFMPTYLRFVKGVLDSNDLPLNVSREILQDNKVTVSLRKACSKRVLTMLAKLAKDDAEKYAKFWSEFGNVLKEGPAEDYANREEIAKLLRFASTAGEGEAQTVSLEDYVGRMKEGQ 438          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HELAH (Chaperone protein htpG OS=Helicobacter acinonychis (strain Sheeba) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45
Identity = 92/197 (46.70%), Postives = 132/197 (67.01%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +N+   +W     E+  ++Y  FYKS  +D  E L+  H  VEG LE+  + ++P  APFD+F    K + +KLYV+RVFI D+ +EL+P YL F+KG++DSEDLPLN+SRE LQQNKIL  IR   VKK +   ++++++ E+Y+KFYE F K LK G++ D  NK KL ELLR++S K  ++L SL +Y   +KE
Sbjct:  232 INQASALWKMNKSELKDKDYKEFYKSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSVAPFDMFRVDYK-SGVKLYVKRVFITDDDKELLPSYLRFIKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILGEIEKLSKDNENYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKE 426          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HAEPS (Chaperone protein htpG OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45
Identity = 88/206 (42.72%), Postives = 141/206 (68.45%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHS--TKSGDELTSLXDYATRMKEAR 694
            +W  +NK + +W R   EI+ EEY  FYK +++D+ + L   H  VEG+ E+ ++L+VP +AP+DLF  R++ + +KLYV+RVFIMD+ E  +P YL F++G++D+ DLPLN+SRE LQ+NK+ + +R  L K+ +++ +++A +N E Y +F+ +F   LK G+ ED  NK ++A L+R+ S  T S ++  SL DY  RMKE +
Sbjct:  226 KWEKINKAQALWTRSKNEISDEEYKEFYKHISHDFADPLIWSHNKVEGKQEYTSLLYVPSKAPWDLFQ-REQKHGLKLYVQRVFIMDDVEVFMPNYLRFMRGLLDTNDLPLNVSREILQENKVTQSLRTALTKRSLQMLEKLAKDNIEQYQQFWNAFGLVLKEGVGEDFANKNQVAALVRFASTHTDSSEQAVSLSDYIARMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45
Identity = 85/111 (76.58%), Postives = 99/111 (89.19%), Query Frame = 2
Query:  134 EEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVI 466
            EE   +EY  FYKSLT+DWE+HLAVKHFSVEGQLEF+A+LF P+RAPFDLF+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F+ G+VDSEDLPLNISRE LQQ+KILK +
Sbjct:  236 EEDDSKEYGEFYKSLTSDWEDHLAVKHFSVEGQLEFRALLFSPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIHGVVDSEDLPLNISREMLQQSKILKYV 346          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_RHOFD (Chaperone protein htpG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 96/232 (41.38%), Postives = 137/232 (59.05%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAE-----------------------------NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW  VNK   IW R  ++IT E+Y  FYK +++D+E  LA  H  VEG  E+  +L++P +AP DLF+ R+K   +KLYV+RVFIMD+ E L+P YL FVKG+VDS DLPLN+SRE LQ+++ +K IR+   K+ + + +++A+                             N+  Y+KFY  F   LK G+ ED  NK +LA+LLR+ S+ +     S  DY  RMKE +
Sbjct:  239 EWETVNKGNAIWARAKKDITPEQYTEFYKQISHDFEAPLAYTHNRVEGSTEYTQLLYLPSKAPMDLFN-REKSAGVKLYVKRVFIMDDAEALLPTYLRFVKGVVDSADLPLNVSRELLQESRDVKAIREGCTKRVLGMLEDLAKHDKLPAPSADGGTDTTAGVSDVLSEEDKANEGKYSKFYAEFGAVLKEGLGEDYANKDRLAKLLRFASSSTDTVSVSFADYKARMKEGQ 469          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_PSEU26.320e-4644.66Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEA66.320e-4643.69Chaperone protein htpG OS=Pseudoalteromonas atlant... [more]
HTPG_BORPA6.320e-4644.17Chaperone protein htpG OS=Bordetella parapertussis... [more]
HTPG_PSEPF1.408e-4543.20Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_AZOSE1.408e-4546.60Chaperone protein htpG OS=Azoarcus sp. (strain EbN... [more]
HTPG_AERS41.408e-4546.12Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_HELAH1.839e-4546.70Chaperone protein htpG OS=Helicobacter acinonychis... [more]
HTPG_HAEPS1.839e-4542.72Chaperone protein htpG OS=Haemophilus parasuis ser... [more]
H90B3_HUMAN1.839e-4576.58Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HTPG_RHOFD2.402e-4541.38Chaperone protein htpG OS=Rhodoferax ferrireducens... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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