FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEMY (Chaperone protein htpG OS=Pseudomonas mendocina (strain ymp) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 93/206 (45.15%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK-SGDELT-SLXDYATRMKEAR 694
            EW  VN+   +W R   E+  EEY  FYK + +D+E  L   H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVFIMD  +E +P YL F+KG+VDS DL LN+SRE LQ++ ++  ++  L K+ +++ +++A++K E+Y  F+++F + LK G  ED  NK K+A LLR+ ST   GDE + SL DY  R+K+ +
Sbjct:  229 EWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLTWSHNKVEGKLEYTSLLYVPGRAPFDLYH-REAPKGLKLYVQRVFIMDQADEFLPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKDKPEEYKAFWKAFGQVLKEGPAEDFANKEKIAGLLRFASTAGEGDEQSVSLADYLGRVKDGQ 433          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 90/206 (43.69%), Postives = 138/206 (66.99%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            +W  +NK + +W R   EI++EEY  FYK L++D+ + L   H  VEG  E+ ++L+VP +AP+DLF+ R+  + +KLYV+RVFIMD+ +  +P YL F++G++DS DLPLN+SRE LQ NK+   +RK L K+ +++ +++A ++ E Y +F++ F   LK G  ED  NK  +A+LLR+ ST   S  +  SL DY  RMKE +
Sbjct:  226 KWEKINKAQALWTRAKNEISEEEYQEFYKHLSHDFTDPLLWAHNKVEGNQEYTSLLYVPAKAPWDLFN-REHKHGLKLYVQRVFIMDDAQVFMPNYLRFMRGLLDSNDLPLNVSREILQDNKVTSALRKALTKRALQMLEKLAKDDAEKYQRFWQEFGLVLKEGPAEDFANKETIAKLLRFASTHNDSSQQSVSLEDYVARMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HELPJ (Chaperone protein htpG OS=Helicobacter pylori J99 GN=htpG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 92/197 (46.70%), Postives = 131/197 (66.50%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +N+   +W     E+ +++Y  FY+S  +D  E L+  H  VEG LE+  + ++P +APFDLF    K + +KLYV+RVFI D+ +EL+P YL FVKG++DSEDLPLN+SRE LQQNKIL  IR   VKK +   + ++++ ++Y+KFYE F K LK G++ D  NK KL ELLR++S   G E  SL +Y   +KE
Sbjct:  232 INQASALWKMNKSELKEKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDLFRVDYK-SGVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDNKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKG-EWISLKEYKENLKE 426          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 91/197 (46.19%), Postives = 133/197 (67.51%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +N+   +W     E+  ++Y  FY+S  +D  E L+  H  VEG LE+  + ++P +APFD+F    K + +KLYV+RVFI D+ +EL+P YL FVKG++DSEDLPLN+SRE LQQNKIL  IR   VKK +   + +++++++Y+KFYE F K LK G++ D  NK KL ELLR++S K  ++L SL +Y   +KE
Sbjct:  232 INQASALWKMNKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYK-SGVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYRENLKE 426          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 95/206 (46.12%), Postives = 134/206 (65.05%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLXDYATRMKEAR 694
            EW  VN+   +W R P+EI  EEY  FYK + +D+E+ L   H  VEG  E+ ++L+VP RAPFDL++ R + + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPLN+SRE LQ NK+   +RK   K+ + +  ++A ++ E Y KF+  F   LK G  ED  N+ ++A+LLR+ ST    E    SL DY  RMKE +
Sbjct:  238 EWEQVNRATALWTRNPKEIKDEEYQEFYKHVAHDFEDPLLWGHNRVEGAQEYTSLLYVPARAPFDLYN-RDQKHGLKLYVQRVFIMDDAEQFMPAYLRFVKGVLDSNDLPLNVSREILQDNKVTVSLRKACSKRVLTMLAKLAKDDAEKYAKFWSEFGNVLKEGPAEDYANREEIAKLLRFASTAGEGEAQTVSLEDYVGRMKEGQ 442          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 89/210 (42.38%), Postives = 142/210 (67.62%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED-----YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   +IT E+Y AFY+ + +D E  L+  H  VEG+ E+  +L++P RAPFDL+D   K + +KLYV+RVFIMD+ E+L+P YL +VKG++DS DLPLN+SRE LQ+++ +K IR+   K+ + + + +A+++E+     Y  F++ F + LK G+ ED+ N+ ++A+LLR+ ST+  + ++  SL  Y  RMKE +
Sbjct:  228 EWESVNQASALWTRPKSDITDEQYIAFYQHIAHDNEAPLSWTHNRVEGRSEYTQLLYIPARAPFDLWDRNHK-HGLKLYVKRVFIMDDAEQLLPSYLRWVKGVIDSADLPLNVSRELLQESRDVKAIREGSTKRVLSMLESLADSEEEAERAKYTTFWQQFGQALKEGLGEDNANQERIAKLLRFASTQNDNAEQSVSLAAYVGRMKEGQ 436          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 94/212 (44.34%), Postives = 141/212 (66.51%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNK-----FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLXDYATRMKEAR 694
            + E   +N+   +W R   EI++E+Y  FYK + +D+E  LA  H  VEG+ E+  +L+VP RAPFDL+D R+  + IKLYVRRVFIMD+ ++L+P YL FV+GI+DS DLPLN+SRE LQ++K ++ +R   VKK + L  ++A+++ D  K     F++ F + +K G+ ED  N+ ++A+LLR+ ST S  E    SL DY  RMK+ +
Sbjct:  228 TEEDETINQASALWARPKNEISEEQYNEFYKHVAHDFEPPLAYVHARVEGKQEYTQLLYVPSRAPFDLYD-RESRHGIKLYVRRVFIMDDAKQLLPNYLRFVRGIIDSNDLPLNVSREILQESKDIEAMRAGSVKKVLGLLDDLAQSETDEGKAKFKTFWKEFGQVMKEGVAEDYANRERIAKLLRFVSTHSDSEEQDVSLSDYVGRMKDGQ 438          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 88/206 (42.72%), Postives = 134/206 (65.05%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            + E   +N  K +W R  +E+++EEY  FYK + + W++ L V     EG  E++A+LF+P  APFDLF+ R     I+LYV+RVFIM +C++L+PEYL FVKG+VD++D+ LN+SRE LQQ++ +K IR+ L KK +   +E+ +E  +DY  F+  F + +K G+  D  N+  L +L  + ST S +E T+L  Y  RMKE +
Sbjct:  237 TREVETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFN-RDAHTGIQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKELQSERLDDYRTFWTQFGRVVKEGLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQ 441          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 88/206 (42.72%), Postives = 134/206 (65.05%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            + E   +N  K +W R  +E+++EEY  FYK + + W++ L V     EG  E++A+LF+P  APFDLF+ R     I+LYV+RVFIM +C++L+PEYL FVKG+VD++D+ LN+SRE LQQ++ +K IR+ L KK +   +E+ +E  +DY  F+  F + +K G+  D  N+  L +L  + ST S +E T+L  Y  RMKE +
Sbjct:  237 TREVETLNSMKALWARPKDEVSEEEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFN-RDAHTGIQLYVKRVFIMGDCDQLMPEYLRFVKGVVDAQDMSLNVSREILQQDRQIKAIRRRLTKKVLSTIKELQSERPDDYRTFWTQFGRVVKEGLLSDFDNQETLLQLCSFASTHSEEEATTLAQYVERMKEGQ 441          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ACIAD (Chaperone protein htpG OS=Acinetobacter sp. (strain ADP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 89/208 (42.79%), Postives = 135/208 (64.90%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-----ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW ++N    +W R   EI++E+Y  FYK+LT+D++  LA  H  VEG  E+  +L++P +A  D+F TR+    IKLYV+RVFIMD+ + LIP YL FVKG++DS DLPLN+SRE LQ+++ +K IR+   ++ + L   +A     +++E +  FY+ F   LK G+ ED TN+ ++ +LLRY ++   +  TS  DY  RMKE +
Sbjct:  239 EWEVINSASALWTRSKNEISEEQYIEFYKNLTHDFDAPLAWSHNRVEGNTEYTQLLYIPAKASSDIF-TREAKAGIKLYVKRVFIMDDADNLIPNYLRFVKGVIDSADLPLNVSRELLQESRDVKTIREGNTRRVLTLLDGLAKSEDEKDQEKFKTFYQEFGSVLKEGLGEDFTNRERILKLLRYATSNQDEISTSFADYKARMKEGQ 445          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_PSEMY2.402e-4545.15Chaperone protein htpG OS=Pseudomonas mendocina (s... [more]
HTPG_PASMU2.402e-4543.69Chaperone protein htpG OS=Pasteurella multocida GN... [more]
HTPG_HELPJ2.402e-4546.70Chaperone protein htpG OS=Helicobacter pylori J99 ... [more]
HTPG_HELPH2.402e-4546.19Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_AERHH2.402e-4546.12Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_RALEJ3.137e-4542.38Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HTPG_NITMU3.137e-4544.34Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_MYCPA3.137e-4542.72Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCA13.137e-4542.72Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_ACIAD3.137e-4542.79Chaperone protein htpG OS=Acinetobacter sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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