FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 93/206 (45.15%), Postives = 134/206 (65.05%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            EW  VNK   +W R   +I  EEY  FYK +++D    LA  H  VEG+LE+ ++L+VP RAPFDL+  R     +KLYV+RVFIMD  E+ +P YL F+KG+VDS DL LN+SRE LQ   ++  ++  L K+ +++ +++A++  EDY  F+++F + LK G  ED +N+ K+A LLR+ ST   SGD   +L DY  RMKE +
Sbjct:  231 EWEAVNKASALWTRPKNDIKDEEYQEFYKHISHDMTNPLAWSHNKVEGKLEYTSLLYVPTRAPFDLYH-RNAAKGLKLYVQRVFIMDQAEQFLPLYLRFIKGVVDSADLSLNVSREILQSGPVVDSMKTALSKRALDMLEKLAKDAPEDYKTFWKNFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALTDYIARMKEGQ 435          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFA (Chaperone protein htpG OS=Xylella fastidiosa GN=htpG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 93/206 (45.15%), Postives = 134/206 (65.05%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            EW  VNK   +W R   +I  EEY  FYK +++D    LA  H  VEG+LE+ ++L+VP RAPFDL+  R     +KLYV+RVFIMD  E+ +P YL F+KG+VDS DL LN+SRE LQ   ++  ++  L K+ +++ +++A++  EDY  F+++F + LK G  ED +N+ K+A LLR+ ST   SGD   +L DY  RMKE +
Sbjct:  232 EWEAVNKASALWTRPKNDIKDEEYQEFYKHISHDMTNPLAWSHNKVEGKLEYTSLLYVPTRAPFDLYH-RNAAKGLKLYVQRVFIMDQAEQFLPLYLRFIKGVVDSADLSLNVSREILQSGPVVDSMKAALSKRALDMLEKLAKDAPEDYKTFWKNFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALADYIARMKEGQ 436          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 89/208 (42.79%), Postives = 134/208 (64.42%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-----ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW  +NK   +W R   EI  EEY  FYK++T D +  LA  H  VEG++++  +L++PK+AP DL+ TR++ + +KLYV+RVFIMD  E+L+P YL FVKG++DS DLPLN+SRE LQ+++ +K IR    ++ + L   +A     + +E + +FY  F   +K G+ ED  N+ ++A+LLRY ++      TS  DY  RMKE +
Sbjct:  261 EWETINKASALWTRSASEIEDEEYIDFYKNITYDMDAPLAWTHNRVEGRVQYTQLLYIPKKAPVDLY-TREQQHGLKLYVKRVFIMDEAEQLLPMYLRFVKGVIDSADLPLNVSRELLQESRDVKSIRDGNARRILTLLASLANSEDSDKQEKFAQFYAEFGDVIKEGVGEDMGNQERIAKLLRYATSTQDSVTTSFEDYKARMKEGQ 467          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 97/209 (46.41%), Postives = 139/209 (66.51%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-----ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMK 685
            S E   +N+   IW R   EIT+E+Y  FYK + +D+E  LA  H  VEG+ E+  +L++P  APFDLFD R+  + +KLYVRRVFIMD+ E+L+P YL FV+GI+DS DLPLN+SRE LQ++K +  IR   VKK + L +++A     E++E +  F+  F + LK GI ED +N+ ++A+LLR+ ST  +  ++  SL DY  RMK
Sbjct:  228 SDEDETINQASAIWARPKNEITQEQYDEFYKHVAHDFEPPLAHVHARVEGKQEYIQLLYIPAHAPFDLFD-REHRHGLKLYVRRVFIMDDAEKLLPGYLRFVRGIIDSSDLPLNVSREILQESKDIDSIRAGSVKKVLGLIEDLAMSDKSEDQEKFKTFWREFGQVLKEGIAEDYSNRERIAKLLRFTSTHDEREEQTVSLDDYIARMK 435          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HELPY (Chaperone protein htpG OS=Helicobacter pylori GN=htpG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 91/197 (46.19%), Postives = 132/197 (67.01%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +N+   +W     E+  ++Y  FY+S  +D  E L+  H  VEG LE+  + ++P  APFD+F    K + +KLYV+RVFI D+ +EL+P YL FVKG++DSEDLPLN+SRE LQQNKIL  IR   VKK +   + +++++++Y+KFYE F K LK G++ D  NK KL ELLR++S K  ++L SL +Y   +KE
Sbjct:  232 INQASALWKMNKSELKDKDYKEFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSTAPFDMFRVDYK-SGVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKE 426          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 93/227 (40.97%), Postives = 137/227 (60.35%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKE------------------------DYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW  VNK   +W R  ++IT E+Y  FYKS+++D+E  L   H  VEG  E+  +L++P +APFDL++  KK   +KLYV+RVFIMD+ E L+P YL FVKG++DS DLPLN+SRE LQ+++ +++IR   VK+ + + +++A++ +                         Y +FY  F   LK G+ ED  N+ +LA+LLR+ ST S     S  DY  RMKE +
Sbjct:  231 EWETVNKASALWTRPKKDITDEQYQDFYKSISHDFENPLTWSHNRVEGNTEYTQLLYIPAKAPFDLWNRDKKAG-VKLYVKRVFIMDDAESLMPSYLRFVKGVIDSADLPLNVSRELLQESRDVRLIRDGSVKRVLSMLEDLAKHDKHEAAAEGADGVQDVVSAEDKAKEGKYTQFYAEFGAVLKEGLGEDFANRERLAKLLRFASTTSDTPSVSFADYKARMKEGQ 456          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_WOLSU (Chaperone protein htpG OS=Wolinella succinogenes GN=htpG PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.350e-45
Identity = 90/199 (45.23%), Postives = 132/199 (66.33%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            VNK   +W     E+ +E+Y  FYKSL++D  + LA  H  VEG  E+  + ++P +APFDL+    + + +KLYV+RVFI D+ +EL+P YL FV+GI+DSEDLPLN+SRE LQQN+IL  I+    KK +   + +A+++E Y  F++ F + LK G++ D  NK KL EL+R+HS+ S ++  SL  Y  RMKE +
Sbjct:  222 VNKAFALWRISKNELKEEDYKEFYKSLSHDSHDPLAWVHIKVEGSQEYTTLFYLPSKAPFDLYRVDYR-SGVKLYVKRVFITDDDKELLPSYLRFVRGIIDSEDLPLNVSREILQQNRILANIKSASTKKILAEIENLAKDEEKYEAFFKEFGRALKEGLYGDFENKEKLLELMRFHSSLSPNKKISLQSYKERMKEGQ 419          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ACTPJ (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=htpG PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.988e-45
Identity = 88/206 (42.72%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            +W  +NK + +W R   EI+ EEY  FYK L++D+ + L   H  VEG+ E+ ++L+VP +AP+D+F+ R++ + +KLYV+RVFIMD+ E  +P YL F++G++D+ DLPLN+SRE LQ+NKI   +R  L K+ ++L +++A +++  Y  F+  F   LK G+ ED  NK ++A L R+ ST+  S ++  SL DY  RMKE +
Sbjct:  224 KWEKINKAQALWTRSKNEISDEEYQEFYKHLSHDYNDSLIWAHNKVEGKQEYTSLLYVPAKAPWDMFN-REQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLPLNVSREILQENKITASLRAALTKRALQLLEKLAKDDQAKYQTFWNEFGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVSLADYVGRMKEGQ 428          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.988e-45
Identity = 89/206 (43.20%), Postives = 138/206 (66.99%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            +W  +NK + +W R   EI+ EEY  FYK L++D+ + L   H  VEG+ E+ ++L+VP +AP+DLF+ R + + +KLYV+RVFIMD+ E  +P YL F++G++D+ DLPLN+SRE LQ+NKI   +R  L K+ ++L +++A +++  Y  F+  F   LK G+ ED  NK ++A L R+ ST+  S ++  SL DY  RMKE +
Sbjct:  224 KWEKINKAQALWTRSKNEISDEEYQEFYKHLSHDYNDSLIWAHNKVEGKQEYTSLLYVPAKAPWDLFN-RDQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLPLNVSREILQENKITASLRAALTKRALQLLEKLAKDDQAKYQTFWNEFGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVSLADYVGRMKEGQ 428          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HSP82_ENCCU (Heat shock protein 90 OS=Encephalitozoon cuniculi GN=HSP90 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.988e-45
Identity = 84/196 (42.86%), Postives = 131/196 (66.84%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTK-LAELLRYHSTKSGDELTSLXDYATRM 682
            +N +KP+W R  +E+ +EE  +FYK+++ DW++ LAV  + +EG L  + ++F+PKRA FD+F+  KK NNIKLY + VF+ D+  + IPE++ FV G+V S+D+P+NISRE +Q   ++K+++K L +K  E+  ++A + E Y  FY+ F   LK+ I E S  +    A+ LRY +TKSG+E  SL  Y  RM
Sbjct:  276 INVEKPLWKRNIKEVPEEELKSFYKTVSGDWDDFLAVDFWHIEGLLSIELLMFIPKRARFDMFNKNKKNNNIKLYCKNVFVTDDFGDAIPEWMSFVSGVVASDDIPMNISREMIQGTNVMKLVKKTLPQKIFEMIGKLALDAEKYKTFYKEFGNCLKMAIGEASEGQQDGYAKCLRYFTTKSGEEAISLDTYVERM 471          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_XYLFT4.096e-4545.15Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]
HTPG_XYLFA4.096e-4545.15Chaperone protein htpG OS=Xylella fastidiosa GN=ht... [more]
HTPG_PSYCK4.096e-4542.79Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_NITEU4.096e-4546.41Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
HTPG_HELPY4.096e-4546.19Chaperone protein htpG OS=Helicobacter pylori GN=h... [more]
HTPG_ACISJ4.096e-4540.97Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_WOLSU5.350e-4545.23Chaperone protein htpG OS=Wolinella succinogenes G... [more]
HTPG_ACTPJ6.988e-4542.72Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_ACTP26.988e-4543.20Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HSP82_ENCCU6.988e-4542.86Heat shock protein 90 OS=Encephalitozoon cuniculi ... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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