FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_RALSO (Chaperone protein htpG OS=Ralstonia solanacearum GN=htpG PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 91/210 (43.33%), Postives = 143/210 (68.10%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-----KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST-KSGDELT-SLXDYATRMKEAR 694
            EW  +N+   +W R   ++T E+Y AFY+ + ++  + LA  H  VEG+ E+  +L++P  APFDL+D R++ + +KLYV+RVFIMD+ E+L+P YL FVKG++DS DLPLN+SRE LQ+++ +K IR+   K+ + + + +A++     K+ Y  F++ F + LK G+ ED  NK ++A+LLR+ ST  +GDE T SL DY  RMK+ +
Sbjct:  228 EWETINQASALWARPRADVTDEQYIAFYQHIAHEQGQPLAWTHNRVEGRSEYTQLLYLPTNAPFDLWD-RERRSGLKLYVKRVFIMDDAEQLLPAYLRFVKGVIDSADLPLNVSREILQESRDVKAIREGSTKRVLGMLESMADSDDAAEKDKYATFWQHFGQVLKEGLGEDFANKDRIAKLLRFASTHNAGDEQTVSLADYIGRMKDGQ 436          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 90/210 (42.86%), Postives = 139/210 (66.19%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED-----YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   +IT E+Y AFY+ + +D E  LA  H  VEG+ E+  +L++P RAPFDL+D   K   +KLYV+RVFIMD+ ++L+P YL +VKG+VDS DLPLN+SRE LQ+++ +K IR+   K+ + + + +A+++++     Y  F+E F + LK G+ ED  N  ++A+LLR+ +T   + ++  SL DY  RMKE +
Sbjct:  228 EWESVNQASALWTRSKSDITDEQYQAFYQHIAHDHEAPLAWTHNRVEGRSEYTQLLYIPARAPFDLWDRNHKAG-LKLYVKRVFIMDDADQLLPAYLRWVKGVVDSADLPLNVSRELLQESRDVKAIREGCAKRVLSMLEAMADSEDEAERAKYKTFWEQFGQVLKEGVGEDHGNGERIAKLLRFATTHGDTAEQSVSLVDYVGRMKEGQ 436          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 86/208 (41.35%), Postives = 136/208 (65.38%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELF-----QEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW  +NK   +W R   ++  +EY  FYK++T D +  L   H  VEG++++  +L++PK+AP DL+ TR++ + +KLYV+RVFIMD+ E+L+P YL FVKG++DS DLPLN+SRE LQ+++ +K IR    ++ + L       E A+ +E + +FY  F   +K G+ ED  N+ ++A+LLRY ++    E+TS  DY  RMK+ +
Sbjct:  251 EWETINKASALWTRTASDVEDDEYVDFYKNITYDMDAPLTWTHNRVEGRVQYTQLLYIPKKAPVDLY-TREQQHGLKLYVKRVFIMDDAEQLLPMYLRFVKGVIDSADLPLNVSREILQESRDVKSIRDGNARRILTLLASLANSEDADKQEKFAQFYAEFGDVIKEGVGEDMGNQERIAKLLRYATSTQDGEMTSFEDYKARMKDGQ 457          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_HAEI8 (Chaperone protein htpG OS=Haemophilus influenzae (strain 86-028NP) GN=htpG PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 89/206 (43.20%), Postives = 138/206 (66.99%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLXDYATRMKEAR 694
            +W  +NK   +W R   +++ EEY AFYK L++D+ + +   H  VEG   + ++L+VP +AP+DLF+ R+  + +KLYV+RVFIMD+ E+ +P YL F++G++DS DLPLN+SRE LQ NKI   +RK L K+ +++ +++A ++ E Y KF++ F   LK G  ED  NK  +A+LLR+ ST +   ++  SL DY  RMKE +
Sbjct:  226 KWEKINKSDALWTRSKNDVSDEEYKAFYKHLSHDFVDPVTWAHNKVEGNQAYTSLLYVPAKAPWDLFN-REHKHGLKLYVQRVFIMDDAEQFMPNYLRFMRGLIDSNDLPLNVSREILQDNKITAALRKALTKRSLQMLEKLAKDDAEKYLKFWKEFGLVLKEGPAEDFANKETIAKLLRFASTHNDGSEQTVSLEDYILRMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_CHRSD (Chaperone protein htpG OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=htpG PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45
Identity = 89/204 (43.63%), Postives = 139/204 (68.14%), Query Frame = 2
Query:   89 WSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            W  VN+   +W+R  EEI+ +EY AFYK + +D+ + L   H  VEG+LE+ ++L+VP RAPFDL+  R+    +KLYV+RVFIMD+ E+ +P YL F+KG+VDS+DL LN+SRE LQ++  +  ++  L K+ +++ +++A+++E Y  F+ +F   LK G  ED  N+ K+A+LLR+ ST+  S  +  SL  Y +RMKE +
Sbjct:  233 WETVNEATALWVRPKEEISDDEYKAFYKHVAHDFSDPLTWSHNKVEGKLEYTSLLYVPGRAPFDLYQ-REGVRGLKLYVQRVFIMDDAEQFLPLYLRFIKGVVDSKDLSLNVSRELLQKDPQVDKLKSALTKRSLDMLKKLAKDEEAYQTFWNAFGNVLKEGPAEDFANRDKIADLLRFSSTQTDSATQDQSLAGYVSRMKEGQ 435          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 92/200 (46.00%), Postives = 134/200 (67.00%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK---SGDELTSLXDYATRMK 685
            +N    IW +   E+ +E+Y  FYKSL++D +E L   H   EG  E+  + +VP +APFD+F    +P  +KL+V+RVFI D+ +EL+P YL FV+G++DSEDLPLN+SRE LQQN+IL  I+   VKK +  F+++AEN KE YNKF   F++ LK G++ D  ++ +LA+L+R+ +T      DE TS  DY +RMK
Sbjct:  239 INDAGAIWQKPKSELKEEDYFNFYKSLSHDSQEPLLYVHTKAEGTQEYTTLFYVPSKAPFDMFHADYRPG-VKLFVKRVFITDDEKELLPTYLRFVRGVIDSEDLPLNVSREILQQNRILSNIKNASVKKLLGEFKKLAENDKEKYNKFIAEFNRPLKEGLYSDYEHREELADLVRFKTTSPEVKEDEWTSFADYVSRMK 437          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSYIN (Chaperone protein htpG OS=Psychromonas ingrahamii (strain 37) GN=htpG PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 88/205 (42.93%), Postives = 135/205 (65.85%), Query Frame = 2
Query:   89 WSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED-YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            W  VNK   +W     E+  EEY  FYK + ND+E+ L   H  VEG+  + ++L++PKRAP+DL++ R+K + +KLYV+RVF+MD+ E+ +P YL FVKG++DS DLPLN+SRE LQ  ++   +R    K+ ++L  ++A+  +D YN F++ F + LK G  EDS+NK K+ +L R+ ST+  S ++  SL  Y +RM E +
Sbjct:  233 WEAVNKATALWSCSKSELKDEEYKEFYKHIANDFEDPLTWSHNKVEGEQAYTSLLYIPKRAPYDLWN-REKAHGLKLYVQRVFVMDDAEQFMPTYLRFVKGVLDSNDLPLNVSREILQDTRVTAKLRSGCTKRVLDLLTKLAKKDDDAYNLFWKEFGQVLKEGPAEDSSNKEKIGKLFRFSSTETDSTEQTVSLDAYISRMTEGQ 436          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_POLSJ (Chaperone protein htpG OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=htpG PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 90/204 (44.12%), Postives = 130/204 (63.73%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED-YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R  ++IT E+Y  FYK ++ D +  LA  H  VEG  E+  +LF+P +AP DLF+ R K   +KLYVRRVFIMD+ + L+P YL FVKG+VDS DLPLN+SRE LQ+++ +K IR+   ++ + + +++A N  D +  FY  F   LK G+ ED  N+ +LA+LLR+ S+ +        DY  RMKE +
Sbjct:  230 EWETVNQAAALWTRAKKDITPEQYDEFYKQISYDSQAPLATTHNRVEGGTEYTQLLFIPAKAPMDLFN-RDKAAGVKLYVRRVFIMDDAQALMPTYLRFVKGVVDSADLPLNVSRELLQESRAVKAIREGNTRRVLSMIEDLAANDADKFKAFYAEFGAVLKEGLGEDFANRERLAKLLRFASSTTDTVSVGFADYKARMKEGQ 432          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_NITEC (Chaperone protein htpG OS=Nitrosomonas eutropha (strain C91) GN=htpG PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 95/209 (45.45%), Postives = 139/209 (66.51%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-----ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMK 685
            S E   VN+   IW R   EIT+E+Y  FYK + +D+E  LA  H  VEG+ E+  +L++P  APFDLFD R+  + +KLY++RVFIMD+ E+L+P YL FV+GI+DS DLPLN+SRE LQ++K +  IR   VKK + L +++A     E++E +  F+  F + LK G+ ED +N+ ++A+LLR+ ST  +  ++  SL DY  RMK
Sbjct:  228 SDEEETVNQASAIWARPKNEITQEQYDEFYKHVAHDFEPPLAHVHARVEGKQEYIQLLYIPAHAPFDLFD-REHRHGLKLYIKRVFIMDDAEKLLPGYLRFVRGIIDSNDLPLNVSREILQESKDIDSIRAGSVKKVLGLIEDLATSDKSEDQEKFKIFWREFGQVLKEGVAEDYSNRERIAKLLRFTSTHDEQEEQTVSLDDYIARMK 435          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 86/204 (42.16%), Postives = 132/204 (64.71%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI-AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            E   +N  K +W +  +E++++EY  FYK + + W++ L V     EG  E++A+LF+P  APFDLF++  K   ++LYV+RVFIM +C++L+P YL FVKG+VD+ED+ LN+SRE LQQN+ +  IR+ L KK +   +++ AE  +DY  F+  F K LK G+  DS N+  L  +  + ST S +E T+L  Y  RMK+ +
Sbjct:  246 ETQTINSMKALWTKSKDEVSEDEYKEFYKHIAHAWDDPLEVIAMKAEGTFEYQALLFIPSHAPFDLFNSDAKIG-MQLYVKRVFIMSDCDQLMPMYLRFVKGVVDAEDMSLNVSREILQQNRQINAIRRRLTKKVLSAIKDLQAERPQDYRTFWTQFGKVLKEGLMSDSDNRDTLLHISSFASTHSDEEPTTLAQYVERMKDGQ 448          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_RALSO9.126e-4543.33Chaperone protein htpG OS=Ralstonia solanacearum G... [more]
HTPG_RALME9.126e-4542.86Chaperone protein htpG OS=Ralstonia metallidurans ... [more]
HTPG_PSYA29.126e-4541.35Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_HAEI89.126e-4543.20Chaperone protein htpG OS=Haemophilus influenzae (... [more]
HTPG_CHRSD9.126e-4543.63Chaperone protein htpG OS=Chromohalobacter salexig... [more]
HTPG_TREDE1.192e-4446.00Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_PSYIN1.192e-4442.93Chaperone protein htpG OS=Psychromonas ingrahamii ... [more]
HTPG_POLSJ1.192e-4444.12Chaperone protein htpG OS=Polaromonas sp. (strain ... [more]
HTPG_NITEC1.192e-4445.45Chaperone protein htpG OS=Nitrosomonas eutropha (s... [more]
HTPG_MYCLE1.192e-4442.16Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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