FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931759_ssr51 microsatellite FC931759_ssr51:51..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:304..1018. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55
Identity = 106/203 (52.22%), Postives = 151/203 (74.38%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +W L+N  KPIW R  +E+ ++EY AFYK+ + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IAE K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+     LTSL  Y  RMKE
Sbjct:  331 DWELMNDIKPIWQRPSKEVEEDEYKAFYKTFSKEHDDPMAYIHFTAEGEVTFKSILFVPNSAPRGLFDEYGSKKSDFIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIAEEKYN-DTFWKEFGTNVKLGVIEDHSNRTRLAKLLRFQSSHHESNLTSLDQYVERMKE 532          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55
Identity = 105/203 (51.72%), Postives = 152/203 (74.88%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  Y  RMKE
Sbjct:  332 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDMTSLDQYVERMKE 533          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.960e-55
Identity = 105/203 (51.72%), Postives = 151/203 (74.38%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +W L+N  KPIW R  +E+  +EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  Y  RMKE
Sbjct:  332 DWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKE 533          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.960e-55
Identity = 105/203 (51.72%), Postives = 151/203 (74.38%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +W L+N  KPIW R  +E+  +EY AFYKS + + ++ +A  HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++ F  N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  Y  RMKE
Sbjct:  332 DWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKE 533          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.659e-54
Identity = 106/230 (46.09%), Postives = 155/230 (67.39%), Query Frame = 2
Query:   83 HEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPN--NIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED----------------------YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            +EW L+N  K IW+R P+E+T+EEY  FY SL+ D+  E+ +A  HF+ EG +EFKA+L+VP +AP DL+++    N  N+KLYVRRVFI D  +EL+P+YL F+KG+VDS+ LPLN+SRE LQQ+  LK I+K L++K +++ +++AE   D                      Y KF+  F K++KLGI ED+ N+ +LA+LLR+ +TKS  +LTSL  Y  RMK+++
Sbjct:  336 YEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEKPMAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEIHDDEKKDVEKSGENDEKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTSLDQYIKRMKKSQ 565          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.305e-54
Identity = 107/228 (46.93%), Postives = 155/228 (67.98%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPN--NIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAE-------NKE--------------DYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            EW L+N  K +W+R P+E+T+EEYA FY SL  D+  ++ ++  HFS EG +EFKA+LFVP +AP DL+++    N  N+KLYVRRVFI D  ++L+P+YL F+ GIVDS+ LPLN+SRE LQQ+  LK I+K L++K +++ +++AE       NKE               Y KF+  F K++KLGI ED+TN+ +LA+LLR+ S+KS  +L SL +Y +RMK  +
Sbjct:  335 EWELLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDDKPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISDEFDDLLPKYLSFLMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEYSNKEKTDDEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKSDGKLVSLDEYISRMKSGQ 562          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.553e-52
Identity = 105/231 (45.45%), Postives = 149/231 (64.50%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEH--LAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPN--NIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA----------------------ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            ++EW L+N  K IW+R P+++T +EY  FY SL  D+ E   LA  HF+ EG +EFKA   +P +AP DL+++    N  N+KLYVRRVFI D  +EL+P+YL F+KG+VDS+ LPLN+SRE LQQ+  LK I+K L++K +++ ++IA                      E K  Y KF+  F K++KLGI ED+ N+ +LA+LLR+ STKS  +LTSL  Y +RMK  +
Sbjct:  339 TYEWELLNDMKAIWLRNPKDVTDDEYTKFYHSLAKDFSEEKPLAWSHFTAEGDVEFKAFTLLPPKAPQDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIADEDPDEANDKDKKEVEESTDNDEKKGQYAKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSEGKLTSLDQYISRMKSGQ 569          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.902e-52
Identity = 103/203 (50.74%), Postives = 149/203 (73.40%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKE 688
            +W L+N  KPIW R  +E+ ++EY AFYKS + + ++ +A  HF+ E +  FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+VDS+DLPLN+SRETLQQ+K+LKVIRK LV+K +++ ++IA+ K + + F++    N+KLG+ ED +N+T+LA+LLR+ S+    ++TSL  Y  RMKE
Sbjct:  253 DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAE-ESTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDDTFWK--GTNIKLGVIEDHSNRTRLAKLLRFQSSHHPTDITSLDQYVERMKE 452          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.454e-50
Identity = 96/201 (47.76%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   95 LVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            +VNK   +W R   EIT E+Y  FYK LT+DWE  LA  HF  +G  +F  +LFVPK+ PFDL    ++   ++L+V+RVFIMD CEEL+P++L FV+G++DS+DLPLN+SRE LQ +++++ IRK++VKK ++L +++A++K +DY  F+++F   LK G+  ++  K KL  LLRY S++  + LTSL DY  RMKE +
Sbjct:  235 VVNKASALWQRSKSEITDEQYQEFYKHLTHDWEAPLAWTHFKADGNTQFTGLLFVPKQPPFDL--DAQQQRGVRLFVKRVFIMDRCEELVPQWLRFVRGVIDSDDLPLNVSRELLQDSQVVRAIRKHVVKKSVDLLEKLAKDKPDDYLTFWKAFGTVLKEGLATEAEQKDKLGGLLRYESSRE-EGLTSLADYVGRMKEGQ 432          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.676e-49
Identity = 96/206 (46.60%), Postives = 144/206 (69.90%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            EW  VN  + +W R+  +IT EEY  FYK++ +D++E L   H  VEG  E+  +L++PKRAP+DL++ R++ + +KLYV+RVFIMD+ E+L+P YL FV+G+VDS DLPLN+SRE LQ NKI + +R    KK +++ +++A ++KE Y +F+++F   LK G  ED TN+ ++AELLR+ ST +    +  SL DY  RMKE +
Sbjct:  235 EWETVNSGQALWTREKSDITDEEYKEFYKTVAHDFDEPLLWSHNKVEGTTEYTNLLYIPKRAPWDLWN-REQQHGVKLYVKRVFIMDDAEQLMPTYLRFVRGLVDSNDLPLNVSREILQDNKITRAMRNGSTKKVLQMLKKLAKDDKEQYQQFWDTFGNVLKEGPAEDHTNRERIAELLRFASTHNDGAVQSVSLDDYIERMKEGQ 439          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
ENPL_CHICK1.149e-5552.22Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_BOVIN1.149e-5551.72Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
ENPL_PIG1.960e-5551.72Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_CANFA1.960e-5551.72Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_ARATH1.659e-5446.09Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_HORVU6.305e-5446.93Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_CATRO1.553e-5245.45Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_RABIT5.902e-5250.74Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HTPG_MYXXD1.454e-5047.76Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_IDILO4.676e-4946.60Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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