FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931759_ssr51 microsatellite FC931759_ssr51:51..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10970 contig Ccv1_Contig10970:304..1018. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_FRAP2 (Chaperone protein htpG OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=htpG PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.504e-47
Identity = 97/206 (47.09%), Postives = 142/206 (68.93%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            E+  VN  K IW+R  +E+T EEY  FYK +++D+ + L   H  VEG LE+ ++L++P+  PFD F  R K   + LYVRRVFIM+N +EL+P YL FVKG++DS DLPLN+SRE LQ NK++  I+K +  K +   +++A ++ E Y KF++SF + LK G+ +D +NK K+A LLR+ +T+SGD  +  SL DY +RMKE +
Sbjct:  225 EYETVNNTKAIWLRSKDEVTDEEYQEFYKYISHDFADALMWIHNKVEGNLEYNSLLYIPQNKPFD-FWNRDKDYGLSLYVRRVFIMEN-KELLPPYLRFVKGVIDSADLPLNVSREILQHNKVIDKIKKAITTKILSELKKLASKDTEKYQKFWDSFGQVLKEGVSDDYSNKEKIAGLLRFATTESGDAKQTVSLADYVSRMKEGQ 428          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.965e-47
Identity = 89/207 (43.00%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   83 HEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLV-KKCIELFQEIA--ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            ++W  +N  KP+WM+  +++TKEEY  F++SL+   +  +   HF  EG  EF++IL++P+  P ++FD     + +KL+VRRVFI DN +EL+P +L F+ G++DS+DLPLN+SRE LQQNKIL  I+K ++  K I + +E++  E+K  YN+F++ F  ++KLG  ED  NK +L + L + S+K  +ELT+   Y  RMKE +
Sbjct:  311 YKWEELNDSKPLWMKAAKDVTKEEYTEFFRSLSKTQDTPITYSHFKTEGDTEFRSILYIPENPPSNMFDLEAAGSGLKLFVRRVFITDNLKELVPNWLRFLVGVIDSDDLPLNVSREMLQQNKILDAIKKKVILVKFISMIKELSEDEDKTKYNEFFKKFGSSMKLGAIEDQANKKRLTKYLLFPSSK--EELTTFAGYVERMKEGQ 515          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.351e-47
Identity = 92/202 (45.54%), Postives = 143/202 (70.79%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            VNK   +W R   +I+++EY  FYK +++D+E  L   H  VEG+ E+ ++L++P +APFDL+D R++ + IKLYV+RVFIMD+ E+L+P+YL FV+G++DS DLPLN+SRE LQ +K ++ I+   VK+ + + +++AENK E+Y KF++ F + LK G  ED  NK ++A LLR+ ST   + +++ S  DY  RMKE +
Sbjct:  231 VNKASALWARNKSDISEQEYQEFYKHVSHDFENPLTWSHNRVEGKQEYISLLYIPSKAPFDLYD-RERQHGIKLYVKRVFIMDDAEQLMPQYLRFVRGVIDSADLPLNVSREILQHSKDIEAIKTASVKRVLSMLEDLAENKPEEYAKFWKEFGRVLKEGPGEDFANKERIAGLLRFASTHADTDEQVVSFKDYIARMKEGQ 431          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.351e-47
Identity = 93/206 (45.15%), Postives = 140/206 (67.96%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            E   VN+   +W R   +IT E+Y  FYK++++D+++ LA  H  VEG+ E+  +L+VPK APFDL+D R     +KLYV+RVFIMD+ E+L+P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AENK EDY  F+  F + LK G  ED+ N+ ++A LLR+ ST  G+  +  S  DY  RMK+ +
Sbjct:  233 ELETVNQANALWTRNKSDITDEQYREFYKTVSHDYDDPLAWTHNRVEGRSEYTQLLYVPKHAPFDLWD-RDARRGVKLYVKRVFIMDDAEQLLPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENKAEDYATFWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQ 437          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.351e-47
Identity = 93/206 (45.15%), Postives = 140/206 (67.96%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            E   VN+   +W R   +IT E+Y  FYK++++D+++ LA  H  VEG+ E+  +L+VPK APFDL+D R     +KLYV+RVFIMD+ E+L+P YL FV+G++DS DLPLN+SRE LQ+++ ++ IR+   K+ + L +++AENK EDY  F+  F + LK G  ED+ N+ ++A LLR+ ST  G+  +  S  DY  RMK+ +
Sbjct:  233 ELETVNQANALWTRNKSDITDEQYREFYKTVSHDYDDPLAWTHNRVEGRSEYTQLLYVPKHAPFDLWD-RDARRGVKLYVKRVFIMDDAEQLLPSYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRVLSLLEDMAENKAEDYATFWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQ 437          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_BDEBA (Chaperone protein htpG OS=Bdellovibrio bacteriovorus GN=htpG PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.466e-47
Identity = 89/204 (43.63%), Postives = 135/204 (66.18%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQE-IAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            E   +N QK +W++ P E+TKEEY  FY+ LT+DW E L   H+  EG +EF A+L+VP + P++ ++ R     + LY++RVFIM +C++L+P YL FVKG+VDS DL LN+SRE LQQ++ +  IRKN+  K +   ++ + + +  Y  F+  F   LK G+  D+ NK KL +LL +HST S D++T++ +Y  RMKE +
Sbjct:  217 EEETLNSQKALWLKSPSEVTKEEYKEFYQHLTHDWNEPLRTVHYRAEGTMEFNALLYVPGKKPWN-YNMRDMEYGLSLYIKRVFIMADCKDLLPPYLRFVKGLVDSSDLSLNVSRELLQQDRQVTQIRKNVTNKALSTLKDLLTKERSAYEDFWTEFGATLKEGLPSDAANKEKLQDLLLFHST-SSDKMTTMDEYVARMKETQ 418          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 94/208 (45.19%), Postives = 139/208 (66.83%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            + EW  VN+   +W R   E+  EEY  FYK + +D+E  LA  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVFIMD  E  +P YL F+KG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST+  SG++  +L DY  R KE +
Sbjct:  227 AEEWETVNRASALWTRSRTEVKDEEYQEFYKHIGHDFENPLAWSHNKVEGKLEYNSLLYVPARAPFDLYQ-REAPRGLKLYVQRVFIMDQAESFLPLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKTALTKRVLDMLEKLAKNEPEKYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTQDDSGEQSVALADYLARAKEGQ 433          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 93/206 (45.15%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLXDYATRMKEAR 694
            EW  VNK   +W R   EI+ +EY  FY+ +++D+ + L   H  VEG+LE+ ++LF+P +APFDL+D    P+ IKLYV+RVFIMD+ E+L+P YL FV+G++DS DLPLN+SRE LQ N+++  +R   VK+ + L +E+AE + E Y  F+  F + LK G  ED +N+ ++A LLR+ ST +  +    SL DY  RM E +
Sbjct:  224 EWETVNKASALWQRSKSEISDDEYKEFYRYVSHDYGDPLTWSHNHVEGRLEYTSLLFIPAKAPFDLWD-HNHPHGIKLYVQRVFIMDDAEQLLPRYLRFVRGVIDSSDLPLNVSREILQGNRVIDQMRSGSVKRILGLLEEMAEKEPEKYQTFWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQ 428          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF2 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 93/206 (45.15%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLXDYATRMKEAR 694
            EW  VNK   +W R   EI+ +EY  FY+ +++D+ + L   H  VEG+LE+ ++LF+P +APFDL+D    P+ IKLYV+RVFIMD+ E+L+P YL FV+G++DS DLPLN+SRE LQ N+++  +R   VK+ + L +E+AE + E Y  F+  F + LK G  ED +N+ ++A LLR+ ST +  +    SL DY  RM E +
Sbjct:  224 EWETVNKASALWQRSKSEISDDEYKEFYRYVSHDYGDPLTWSHNHVEGRLEYTSLLFIPAKAPFDLWD-HNHPHGIKLYVQRVFIMDDAEQLLPRYLRFVRGVIDSSDLPLNVSREILQGNRVIDQMRSGSVKRILGLLEEMAEKEPEKYQTFWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQ 428          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEHT (Chaperone protein htpG OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 90/206 (43.69%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHS--TKSGDELTSLXDYATRMKEAR 694
            EW  +N+   +W R   E++ +EY  FYK ++ DWE+ L+  H  VEG+ E+ ++L++PK+APFDL++ R + + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPLN+SRE LQ NK+ + IRK    + I++ + +A+NK +DY  F+  F + +K G  ED+ NK  + +LLR+ S  T S  +  SL  Y  RM E +
Sbjct:  232 EWESINRATALWTRDKSELSDDEYKEFYKHVSLDWEDPLSWAHNKVEGKTEYTSLLYIPKKAPFDLWN-RDRQSGLKLYVQRVFIMDDAEQFMPSYLRFVKGLLDSNDLPLNVSREILQDNKVTQAIRKGCTSRIIKMLERMAKNKADDYQVFWNEFGQVIKEGPAEDAANKEAICKLLRFSSTHTDSATQDVSLEQYVERMNEGQ 436          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_FRAP21.504e-4747.09Chaperone protein htpG OS=Francisella philomiragia... [more]
ENPL_DICDI1.965e-4743.00Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_METFK3.351e-4745.54Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_BORPE3.351e-4745.15Chaperone protein htpG OS=Bordetella pertussis GN=... [more]
HTPG_BORBR3.351e-4745.15Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_BDEBA7.466e-4743.63Chaperone protein htpG OS=Bdellovibrio bacteriovor... [more]
HTPG_PSEPK9.750e-4745.19Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_ACIF59.750e-4745.15Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_ACIF29.750e-4745.15Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_PSEHT1.273e-4643.69Chaperone protein htpG OS=Pseudoalteromonas halopl... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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