FC931759

Overview
NameFC931759
Unique NameFC931759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_NOCFA (Chaperone protein htpG OS=Nocardia farcinica GN=htpG PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 92/205 (44.88%), Postives = 137/205 (66.83%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI--AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLXDYATRMKEAR 694
            E   +N +K +W R   E++ EEY  FYK +++ W+E L +     EG  E++A+LF+P +APFDLF TR+    ++LYV+RVFIMDNCEEL+PEYL FVKG+VD++DL LN+SRE LQQ++ +++IRK LVKK +   +++  AE++  Y  F+  F + LK G+  D  N+  + ++  + ST S  ELT+L  Y  RM E +
Sbjct:  238 EEQTLNSRKALWTRPRGEVSDEEYKEFYKHVSHAWDEPLEIIPLKAEGTFEYQALLFLPSQAPFDLF-TREHKRGVQLYVKRVFIMDNCEELMPEYLRFVKGVVDAQDLSLNVSREILQQDRQIQMIRKRLVKKVLATVKDLQQAEDQSKYQTFWREFGRVLKEGLLSDFDNRETILQVSSFASTHSDSELTTLAQYVERMPEGQ 441          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAE-NKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLXDYATRMKEAR 694
            +N  K IW R   EI++EEY  FYK +++D+++     H+S EG  EFKA++++P   PFDLF  R     + LYV+RVFI DNCE L+P+YL F+KG+VDS DLPLN+SRE LQ++  +K I KNLV K +    E  E   EDY KFY+ F   LK G+H D  NK KL EL+ + S+K+      SL +Y  RM EA+
Sbjct:  239 LNSMKAIWTRAKSEISEEEYEEFYKHISHDYDKPFRTIHYSAEGTSEFKALIYIPSHKPFDLF-MRDHKKGVHLYVKRVFITDNCEALLPDYLRFMKGVVDSSDLPLNVSREILQEDIQIKRIEKNLVGKILSTLVETKEKTPEDYLKFYKEFGPVLKEGVHFDHANKEKLQELILFESSKTEAGNYISLKEYVARMPEAQ 438          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 96/205 (46.83%), Postives = 133/205 (64.88%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKED-YNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLXDYATRMKEAR 694
            E   +N  K IW R   E+T+EEY  FYK +++D+E+ L   H+S EG  EFKA+L++P   PFDLF   +K   ++LYVRRVFI D+CE+L+P+YL FVKG+VDS DLPLN+SRE LQ++  +K I+K+LV K +    E+ E + D Y  FY+ F   LK G+H D  N+ KL +LL + ST +      SL +Y  RM E +
Sbjct:  236 EEETLNSMKAIWTRSKSEVTEEEYEEFYKHVSHDFEKPLKTIHYSAEGTSEFKALLYLPAHKPFDLFMPERK-KGVQLYVRRVFITDSCEQLLPDYLRFVKGVVDSSDLPLNVSREILQEDVQIKRIQKSLVSKILSTLSEMREKEADSYLDFYKEFGPVLKEGVHFDYANRDKLQDLLLFESTATDAGSFVSLKEYVERMPEGQ 439          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 92/205 (44.88%), Postives = 141/205 (68.78%), Query Frame = 2
Query:   89 WSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLXDYATRMKEAR 694
            W  VN    +WMR   EI+ ++Y AFYK + +D+++ +   H  VEG+  + ++L++PK  PFDL++ R+  + IKLYVRRVFIM++ E+L+P YL FV+G+VDS+DLPLN+SRE LQ N +L  IR   VK+ ++  +++A+N+ E Y +FY +F K LK G+ ED  N+ ++A+LLR+ +T+  +E    SL DY  RMKE +
Sbjct:  236 WETVNNTNALWMRPKSEISDDDYKAFYKHVAHDFDDPMVWLHNHVEGRQSYTSLLYIPKNPPFDLYE-REPAHGIKLYVRRVFIMEDTEKLMPRYLRFVRGLVDSDDLPLNVSRELLQHNPLLDKIRSASVKRILDRLEKMAKNEPEQYAEFYGNFGKVLKEGVAEDFANRERIAKLLRFSTTQDENETPDVSLDDYIARMKEGQ 439          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_THIDA (Chaperone protein htpG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=htpG PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 96/202 (47.52%), Postives = 140/202 (69.31%), Query Frame = 2
Query:   98 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            VNK   +W R  ++I+ +EY  FYK + +D+E  LA  H  VEG+ E+ ++L+VP  APFDL+D R+K + IKLYVRRVFIMD+ E+L+P+YL FV+G++DS DLPLN+SRE LQ ++ +  I+   VKK + + +++AEN+ E Y +F++ F K +K G  ED  NK K+A LLR+ ST +    ++ SL DY  RMKE +
Sbjct:  232 VNKASALWARPKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYD-REKRHGIKLYVRRVFIMDDAEQLMPQYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKKVLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQ 432          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_METCA (Chaperone protein htpG OS=Methylococcus capsulatus GN=htpG PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 94/205 (45.85%), Postives = 139/205 (67.80%), Query Frame = 2
Query:   89 WSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHS--TKSGDELTSLXDYATRMKEAR 694
            W  VN    +W +  +EIT E Y  FYK +++D++E LA  H  VEG  E+  +L++PK APFDL+D R     +KLYVR+VFIM++ ++L+P YL FV+G++DS+ LPLN+SRE LQ+NK L+ IR   VKK + L +++A N+ E Y  F++ F + LK G+ ED  NK +LA+LLR+ S  T S ++  +L +Y +RMKE +
Sbjct:  231 WETVNSASALWAKNRDEITDEAYDEFYKHVSHDFQEPLARVHSRVEGTNEYTLLLYIPKHAPFDLWD-RDSKRGVKLYVRKVFIMEDSDKLMPRYLRFVRGVIDSDSLPLNVSREILQENKQLEKIRGGAVKKVLGLLEDLANNEPEKYQAFWKEFGQVLKEGLIEDFANKDRLAKLLRFSSTHTDSEEQTVTLDEYVSRMKEGQ 434          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_CHRVO (Chaperone protein htpG OS=Chromobacterium violaceum GN=htpG PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 95/208 (45.67%), Postives = 139/208 (66.83%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLXDYATRMKEAR 694
            S E   VN    +W R   +I++E+Y  FYK + +D+   LA  H  VEG+ E+  +L++P RAPFDL+D R++   +KLYVRRVFIM++ E+L+P YL FV+G++DS DLPLN+SRE LQ++K +  IR   VKK + L ++++ N+ E Y +F++ F + LK G+ ED  NK ++A+LLR+ ST S D     SL DY  RMKE +
Sbjct:  224 SDEMEAVNSASALWTRSKNDISEEQYQEFYKHVAHDFTAPLAWSHARVEGRQEYTELLYIPSRAPFDLYD-RERKQGVKLYVRRVFIMEDTEKLMPHYLRFVRGVIDSNDLPLNVSREILQESKDIDAIRAGCVKKVLGLLEDLSANQPEKYAEFWKEFGQVLKEGVGEDFANKERIAKLLRFVSTASEDAEPTVSLADYIGRMKEGQ 430          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 93/208 (44.71%), Postives = 138/208 (66.35%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            + EW  VN+   +W R   E+  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVF+MD  E  +P Y+ FVKG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  SL DY  R KE +
Sbjct:  228 AQEWETVNRASALWTRPRTEVKDEEYQEFYKHVAHDYENPLSWSHNKVEGKLEYTSLLYVPARAPFDLYQ-REAPRGLKLYVQRVFVMDQAESFLPLYMRFVKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNEPEQYKGFWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLADYLARGKEGQ 434          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEFS (Chaperone protein htpG OS=Pseudomonas fluorescens (strain SBW25) GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 91/208 (43.75%), Postives = 140/208 (67.31%), Query Frame = 2
Query:   80 SHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLXDYATRMKEAR 694
            + EW +VN+   +W R   EI  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVF+MD  E  +P YL F+KG+VDS DL LN+SRE LQ++ I+  ++  L K+ +++ +++A+N+ E Y  F+++F + +K G  ED  NK K+A LLR+ ST+   G+++ SL +Y  R KE +
Sbjct:  229 AQEWEVVNRASALWTRPRTEIKDEEYQEFYKHIGHDYENPLSWSHNKVEGKLEYSSLLYVPARAPFDLYQ-REAPKGLKLYVQRVFVMDQAESFLPLYLRFIKGVVDSNDLSLNVSREILQKDPIIDSMKSALTKRVLDMLEKLAKNEPEQYKGFWKNFGQVMKEGPAEDFANKEKIAGLLRFASTQGDDGEQVVSLAEYLARAKEGQ 435          
BLAST of FC931759 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 93/206 (45.15%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   86 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLXDYATRMKEAR 694
            EW  VN+   +W R   E+  EEY  FYK + +D+E  L+  H  VEG+LE+ ++L+VP RAPFDL+  R+ P  +KLYV+RVFIMD  +E +P YL F+KG+VDS DL LN+SRE LQ++ ++  ++  L K+ +++ +++A+N+ E Y  F+++F + LK G  ED  NK K+A LLR+ ST   SG++  +L DY  RMKE +
Sbjct:  229 EWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLSWSHNKVEGKLEYTSLLYVPGRAPFDLYH-REAPRGLKLYVQRVFIMDQADEFLPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKNEPEQYKTFWKNFGQVLKEGPAEDFGNKEKIAGLLRFASTGDDSGEQSVALADYIGRMKEGQ 433          
The following BLAST results are available for this feature:
BLAST of FC931759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HTPG_NOCFA1.273e-4644.88Chaperone protein htpG OS=Nocardia farcinica GN=ht... [more]
HTPG_GEOUR1.273e-4647.76Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_GEOSL1.273e-4646.83Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_ALHEH1.273e-4644.88Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
HTPG_THIDA1.663e-4647.52Chaperone protein htpG OS=Thiobacillus denitrifica... [more]
HTPG_METCA1.663e-4645.85Chaperone protein htpG OS=Methylococcus capsulatus... [more]
HTPG_CHRVO1.663e-4645.67Chaperone protein htpG OS=Chromobacterium violaceu... [more]
HTPG_PSESM2.172e-4644.71Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEFS2.172e-4643.75Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_PSEAE2.172e-4645.15Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]

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Properties
Property NameValue
Genbank descriptionC34108F07EF PostHarvP1 Citrus clementina cDNA clone C34108F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931759 ID=FC931759; Name=FC931759; organism=Citrus clementina; type=EST; length=714bp
GGATGAGGAGGGTAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAG
AGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTG
AACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAAGA
AGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACT
TGGCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATC
CTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAA
GCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGACAACT
GTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTGTTGAT
TCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAGAACAA
GATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCT
TCCAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCA
TTCTCTAAGAACCTAAAGCTTGGTATCCATGAGGACTCCACCAACAAGAC
CAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGT
TGACTAGCTTGAANGATTATGCGACCAGAATGAAGGAGGCCAGAATGATA
TCTACTACATCACT
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