FC931760

Overview
NameFC931760
Unique NameFC931760
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931760 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAB (Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahcY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.426e-35
Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 3
Query:  180 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLP 695
            GYG  G+G A   +  GA VIV E+DPI AL+A M+G  V+++++     DIFVT TGN   I  +H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A+   + +++  + E +VYVLP
Sbjct:  218 GYGWCGRGIAMRARGLGATVIVVEVDPIKALEARMDGFLVMSMKEAAKIGDIFVTATGNIKCIRREHFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKD-GRRLYLLADGRLVNLVAADGHPAEIMDMSFALQ--AKAAEYIKENHERLEPRVYVLP 385          

HSP 2 Score: 59.6918 bits (143), Expect = 2.426e-35
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 2
Query:    2 GVKRLYQMQENGTLLFPVINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGK-VAVLRLW*CWQGL 205
            GV RL  M+ +  L FPVI VNDS  K  FDN YG   S  DG+MRAT++++AGK V V+    C +G+
Sbjct:  158 GVIRLRAMERDKVLRFPVIAVNDSYMKYLFDNRYGTGQSTWDGIMRATNLLVAGKNVVVVGYGWCGRGI 226          
BLAST of FC931760 vs. ExPASy Swiss-Prot
Match: SAHH_HALWD (Adenosylhomocysteinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=achY PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.718e-29
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 3
Query:  180 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDV-----LGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLP 695
            GYG  GKG A       A VIVTE++P  AL+A MEG +V+ + +  +  D+FVTTTGN+D+I  +  + M + AI+ N GHFD EI++     L ++TY     +      D          + VLAEGRL+NL    A GHP+ VM  SF  Q +   EL + KS+  Y+  V+ +P
Sbjct:  226 GYGYCGKGVAQKAAGQNANVIVTEVEPRRALEAHMEGYEVMPMNEAATRGDVFVTTTGNRDVITQEDFEVMSDGAILANAGHFDVEINLEELSELAIDTYEARDGVQAYELGD-------GRRLNVLAEGRLVNLAAPIALGHPAEVMDQSFGIQAVCVRELIENKSS--YDAGVHNVP 395          

HSP 2 Score: 41.5874 bits (96), Expect = 1.718e-29
Identity = 23/59 (38.98%), Postives = 32/59 (54.24%), Query Frame = 2
Query:    2 GVKRLYQMQENGTLLFPVINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVL 178
            GV RL  M E+  L +PV  VND+  K  FDN++G   S    +   T++  AGK  V+
Sbjct:  166 GVHRLRAMDEDDELQYPVFAVNDTPMKRLFDNVHGTGESALATIAMTTNLSYAGKNVVV 224          
BLAST of FC931760 vs. ExPASy Swiss-Prot
Match: SAHH_HALSA (Adenosylhomocysteinase OS=Halobacterium salinarium GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.753e-25
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  180 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGL--------ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG--CATGHPSFVMSCSFTNQVIAQLEL 644
            GYGD G+G A       A VIVTE++P  AL+A MEG  V+ + +     D+F+TTTGNK++I   H ++M +  ++ N GHFD E+++  L        E   GV+   +               + VLAEGRL+NL      GHP  VM  SF  Q +   EL
Sbjct:  221 GYGDCGRGVAKKAAGQNANVIVTEVEPRRALEAHMEGYDVMPMAEAAEVGDVFLTTTGNKNVITRAHFERMDDGVVLANAGHFDVEVNLDHLSELAVSEREAREGVREYEL----------ADGRRLNVLAEGRLVNLASPIGLGHPVGVMDQSFGVQAVCVREL 375          

HSP 2 Score: 40.4318 bits (93), Expect = 1.753e-25
Identity = 22/59 (37.29%), Postives = 32/59 (54.24%), Query Frame = 2
Query:    2 GVKRLYQMQENGTLLFPVINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVL 178
            GV RL  M ++  L +PV  VND+  K  FDN++G   S    +   T++  AGK  V+
Sbjct:  161 GVHRLRAMDDDDALEYPVFAVNDTPMKRLFDNVHGTGESALANIAMTTNLSWAGKDVVV 219          
BLAST of FC931760 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25
Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 3
Query:  177 CGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT--IKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEK 656
            CGYG  G+G A   +  GA VIVTE+DPI AL+A M+G +V+ + D + +ADI +T TGN D++       MK+  ++ N GHF+ EI+   LE    + R T  +K   + ++ P+    I +LAEGRL+NL      GHP+ +M  SF  Q ++   L +EK
Sbjct:  212 CGYGWCGRGIAMRAEGLGASVIVTEVDPIRALEARMDGFRVMKVSDAVKEADILITATGNTDVVSESEFMNMKDGCVMANSGHFNVEINREALEE---LSRETGKVKEDIEVFIMPDGRK-IYLLAEGRLVNLASERGQGHPAEIMDMSFAMQALSARHLLQEK 371          
BLAST of FC931760 vs. ExPASy Swiss-Prot
Match: SAHH_STRFR (Adenosylhomocysteinase (Fragment) OS=Streptomyces fradiae GN=ahcY PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  465 PGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLP 695
            PG+ +  +KPQ   W F +    IIVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLP
Sbjct:    2 PGIVKDEVKPQVHTWTFADGKK-IIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELYTKPE--QYPTDVYVLP 75          
The following BLAST results are available for this feature:
BLAST of FC931760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_PYRAB2.426e-3539.53Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahc... [more]
SAHH_HALWD1.718e-2939.11Adenosylhomocysteinase OS=Haloquadratum walsbyi (s... [more]
SAHH_HALSA1.753e-2536.97Adenosylhomocysteinase OS=Halobacterium salinarium... [more]
SAHH_METTH8.228e-2539.63Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_STRFR2.933e-1453.25Adenosylhomocysteinase (Fragment) OS=Streptomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC34108F08EF PostHarvP1 Citrus clementina cDNA clone C34108F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931760 ID=FC931760; Name=FC931760; organism=Citrus clementina; type=EST; length=722bp
CGGTGTCAAGAGATTGTATCAGATGCAAGAAAATGGAACCCTCTTGTTCC
CTGTCATCAATGTCAATGACTCTGTCACCAAGAGCAAGTTTGATAACTTG
TATGGATGCCGCCACTCGCTCCCAGATGGTTTGATGAGAGCTACTGATGT
TATGATTGCCGGAAAGGTTGCTGTTTTGCGGTTATGGTGATGTTGGCAAG
GGTTGTGCTGCTGCTTTGAAGCAAGCCGGTGCTCGTGTAATTGTTACCGA
GATTGATCCAATTTGCGCTCTCCAGGCTCTTATGGAGGGTCTTCAAGTCC
TAACCCTTGAGGATGTCCTCTCCGATGCTGACATCTTTGTTACCACCACC
GGTAACAAGGACATCATCATGGTTGACCACATGAAGAAGATGAAGAACAA
TGCAATTGTTTGCAACATTGGTCACTTTGATAATGAAATTGATGTGCTCG
GTCTTGAGACCTACCCGGGTGTTAAGCGCATTACCATCAAGCCCCAAACT
GATAGGTGGGTCTTCCCCGAGACCAACTCAGGCATCATCGTGTTGGCTGA
GGGACGTCTCATGAACTTGGGATGTGCCACTGGGCACCCCAGCTTTGTGA
TGTCCTGTTCCTTCACCAATCAGGTGATTGCCCAGCTTGAGCTCTGGAAG
GAGAAGAGCACCGGCAAGTACGAGAAGAAAGTGTATGTTCTGCCCAGCAC
CTCGATGAGAAAGTGCTGCTCT
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