FC931768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: FUMC_PROMP (Fumarate hydratase class II OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fumC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.365e-26 Identity = 66/159 (41.51%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGK-AIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 RS+ NF IG E +P ++ + ++K+ AA N + GL + K I++A E+ +GK + FPL +WQTGSGTQ+NMN NEVI+N AA G +HPND VN+SQS+NDTFP + I+ + +L+P++K L L SKS +++ +K+ Sbjct: 29 RSIINFSIG--EELIPIELIYSLTVIKRAAAISNFKLGLINNVKKDLIIEACTEILDGKHDSQFPLKIWQTGSGTQTNMNINEVISNIAALKTNSGLGSHHPIHPNDDVNKSQSTNDTFPAAIQISVVTQIIKKLVPSIKELTKVLDSKSNKWKDLIKI 185
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_HAEIN (Aspartate ammonia-lyase OS=Haemophilus influenzae GN=aspA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.733e-25 Identity = 67/160 (41.88%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEV-AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+++NF+I VR ++KK A N E G P+ I KAI+ A E+ GK D FP V+Q G+GT NMN NEV+AN A E +GHK+GE +++P DHVN SQS+ND +PT I A + +LI ++ LH+S +K+ EF +K+ Sbjct: 31 RAVENFNISNVTISDVPEFVRGMVMVKKATALANGELGAIPSDIAKAIVAACDEILTTGKCLDQFPSDVYQGGAGTSVNMNTNEVVANLALEKIGHKKGEYNVINPMDHVNASQSTNDAYPTGFRI-AVYNSILKLIDKIQYLHDSFDNKAKEFANILKM 189
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_HELPJ (Aspartate ammonia-lyase OS=Helicobacter pylori J99 GN=aspA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.277e-24 Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+ +NF I ++ +++F +KK AA N + GL D + AI A + +GK +D F + + Q G+GT +NMN NEVIAN A E +GH++GE + HPNDHVNRSQS+ND +P+ + I A E S L+ +K L ++ K+ EF +K+ Sbjct: 25 RASENFFITNDKLCSYPVFIKSFAQVKKAAALANAQLGLIDEKLKIAICHACDLLVDGKYHDQFIVDMIQGGAGTSTNMNMNEVIANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYPSALKI-AIYERLSNLVAPMKALRDAFAQKAKEFAHVIKM 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_HELPY (Aspartate ammonia-lyase OS=Helicobacter pylori GN=aspA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.845e-24 Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+ +NF I ++ +++F +KK A N++ GL D + AI A + +GK +D F + + Q G+GT +NMN NEVIAN A E +GH++GE + HPNDHVNRSQS+ND +P+ + I A E S L+ +K L ++ K+ EF +K+ Sbjct: 25 RASENFFITNDKLCSYPVFIKSFAQVKKAATLANVQLGLIDEKLKIAICHACDLLIDGKYHDQFIVDMIQGGAGTSTNMNMNEVIANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYPSALKI-AIYERLSNLVAPMKALRDAFAQKAKEFAHVIKM 182
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_SHIFL (Aspartate ammonia-lyase OS=Shigella flexneri GN=aspA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.844e-23 Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT I A + +L+ + L K+VEFQ +K+ Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRI-AVYSSLIKLVDAINQLREGFERKAVEFQDILKM 187
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_ECOLI (Aspartate ammonia-lyase OS=Escherichia coli (strain K12) GN=aspA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.844e-23 Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT I A + +L+ + L K+VEFQ +K+ Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRI-AVYSSLIKLVDAINQLREGFERKAVEFQDILKM 187
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_ECOL6 (Aspartate ammonia-lyase OS=Escherichia coli O6 GN=aspA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.844e-23 Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT I A + +L+ + L K+VEFQ +K+ Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRI-AVYSSLIKLVDAINQLREGFERKAVEFQDILKM 187
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_ECO57 (Aspartate ammonia-lyase OS=Escherichia coli O157:H7 GN=aspA PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.844e-23 Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT I A + +L+ + L K+VEFQ +K+ Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRI-AVYSSLIKLVDAINQLREGFERKAVEFQDILKM 187
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_SERMA (Aspartate ammonia-lyase OS=Serratia marcescens GN=aspA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.409e-23 Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R+++NF I + VR ++KK AA N E P I I+QA EV + GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDH+N+ QS+ND +PT I A +N +LI + L K+ EF+ +K+ Sbjct: 29 RAIENFYISNSKISDVPEFVRGMVMVKKAAAMANKELKTIPRKIADVIIQACDEVLDKGKCMDQFPVDVFQGGAGTSLNMNTNEVLANIGLELMGHQKGEYQYLNPNDHLNKCQSTNDAYPTGFRI-AVYASNQKLIDAINQLREGFDRKAKEFETILKM 187
BLAST of FC931768 vs. ExPASy Swiss-Prot
Match: ASPA_PSEAE (Aspartate ammonia-lyase OS=Pseudomonas aeruginosa GN=aspA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.252e-20 Identity = 58/159 (36.48%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAAMETNSRLIPNLKVLHNSLHSKSVEFQGYVKL 471 R++ NF + G +V A ++K+ AA N + G L AI +A + G ++ F + + Q G+GT +NMNANEVIAN A E +GH +GE K +HPN+ VN +QS+ND +PT + + + + L+ +L L + +K VEF G +K+ Sbjct: 31 RAVNNFRLSGVPLSHYPKLVVALAMVKQAAADANRQLGHLPEDKHAAISEACARLIRGDFHEQFVVDMIQGGAGTSTNMNANEVIANIALEAMGHTKGEYKYLHPNNDVNMAQSTNDAYPTAIRLGLLL-GHDTLLASLDSLIQAFAAKGVEFAGVLKM 188 The following BLAST results are available for this feature:
BLAST of FC931768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931768 ID=FC931768; Name=FC931768; organism=Citrus clementina; type=EST; length=473bpback to top |