FC931771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10B_SCHPO (60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.500e-72 Identity = 119/164 (72.56%), Postives = 135/164 (82.32%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQK 545 M RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G ARV IGQVL+SVR KDS+ A EALRR ++KFPG+Q+ Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQR 164 HSP 2 Score: 47.3654 bits (111), Expect = 1.500e-72 Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 542 KIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVKCKLLGCHGPL 670 +IIVS+KWGF++++R +Y+ +S I+PDG K L G L Sbjct: 164 RIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSL 206
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10A_SCHPO (60S ribosomal protein L10-A OS=Schizosaccharomyces pombe GN=rpl10a PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 1.957e-72 Identity = 118/164 (71.95%), Postives = 135/164 (82.32%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQK 545 M RRPARCYR KNKPYPKSR+ R VPD KIRI+D+G K+ GVDEFP C+HLVS E E ++SEALEAARI NKY+ K GKD+FHLRVR HPFHV+RINKMLSCAGADRLQTGMR AFGKP G ARV IGQ+L+SVR KDS+ A EALRR ++KFPG+Q+ Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQR 164 HSP 2 Score: 47.3654 bits (111), Expect = 1.957e-72 Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 2 Query: 542 KIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVKCKLLGCHGPL 670 +IIVS+KWGF++++R +Y+ +S I+PDG K L G L Sbjct: 164 RIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSL 206
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 3.039e-70 Identity = 122/164 (74.39%), Postives = 133/164 (81.10%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQK 545 M RRPARCYR KNKPYPKSR+ R VPD KIRIYD+G KK VDEFP CVHLVS E E +SSEALEAARI NKYM +G+DAFHLRVRVHPFHVLRINKMLSCAGADRLQ GMRGA+GKP G ARV IGQ++ SVR KDSN E LRRA++KFPG+QK Sbjct: 1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQK 164 HSP 2 Score: 40.0466 bits (92), Expect = 3.039e-70 Identity = 18/43 (41.86%), Postives = 24/43 (55.81%), Query Frame = 2 Query: 542 KIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVKCKLLGCHGPL 670 KII+S+KWGFT R +YL+ + + DG K L G L Sbjct: 164 KIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSL 206
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 5.114e-64 Identity = 111/163 (68.10%), Postives = 126/163 (77.30%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQ 542 MGRRPA+CYR KNK YPKSR+CRGVP+ KIRIYD GM+K D FP HL+S E+E + SEALEAARI NKYM K AGK+A+H+RVRVHPFHV RINKMLSCAGADRLQ GMRGAFGKP G ARV IGQ L+S+R K + AL+RA +KF GRQ Sbjct: 1 MGRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQ 163 HSP 2 Score: 34.6538 bits (78), Expect = 5.114e-64 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 2 Query: 545 IIVSRKWGFTKFSRSDYLRFKSENRIVPDGVKCKLLGCHGPL 670 I S WGFT+ +Y+++K E + DGV K+L G L Sbjct: 165 IAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRL 206
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.224e-59 Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQK 545 MGRRP RCYR + K YPKSRF RGVPD KI+I+D+G +K GV EFP V+ +S E+E++S+EALEAARI NKYM K AGKD FHLR+RV+PFHVLRINKMLSCAGADRLQTGMRG+FGKP G ARV Q +LS+R K+S A EALRRAK KFPG QK Sbjct: 1 MGRRPGRCYRYLSKKAYPKSRFNRGVPDSKIQIFDLGRRKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQK 164 HSP 2 Score: 23.8682 bits (50), Expect = 1.224e-59 Identity = 11/31 (35.48%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 542 KIIVSRKWGFTKFSRSDYLRFKSENRIVPDG 634 KI VS K+GFT ++ + RI+ G Sbjct: 164 KIQVSSKFGFTNMFSDEFNKLNESGRIILRG 194
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.029e-58 Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 3 Query: 267 CNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQK 545 C A AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD N+ HAQEALRRAKFKFP RQK Sbjct: 1 CGGCEAGSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQK 93 HSP 2 Score: 82.4185 bits (202), Expect = 1.029e-58 Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 542 KIIVSRKWGFTKFSRSDYLRFKSENRIVPDGVKCKLLGCHGPL 670 KIIVSRKWGFTKFSR+DYL++KSENRIVPDGV KLLGCHG L Sbjct: 93 KIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHGRL 135
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 533 M RPAR YR+ K Y + + +GVPDPKI+ +D+G +F V LV+ E+ V+ ALEAAR+A N+Y+ K G+ +HL++RV+P HVLR N + + AGADR+Q GMR AFGKP G ARV GQ +++VR N HA+EALRRA KFP Sbjct: 1 MVNRPARIYREWKGPAYTRREYIKGVPDPKIQQFDMG---NPAGDFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFP 157
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.735e-32 Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 533 M RPARCY PY + + GVP PKI +++G ++ ++++ LV E + ALEAARIA NKY+A G F+ R+RV+P HV+R NKM++ AGADRLQ GMR AFGKP G ARV G V+L V + + + +EALRR KFP Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREM-MEKWEIKGELVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFP 159
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32 Identity = 72/160 (45.00%), Postives = 96/160 (60.00%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 533 M RPARCY PY + + GVP PKI +++G ++ + LV E + ALEAAR+ NKY++ G + L++RV+P HVLR NKM++ AGADRLQ GMR AFGKP G ARV G +++ VR + + HA+EALRRA K P Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIPGVPQPKIVKFEMGNVH---GDYDYRAELVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGKPIGTAARVYPGTIVMEVRVRKEHVEHAKEALRRAASKLP 157
BLAST of FC931771 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.024e-31 Identity = 74/161 (45.96%), Postives = 95/161 (59.01%), Query Frame = 3 Query: 54 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKESVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGACARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFP 533 M RPARCYR+IK PY + + G P +I +D+G F LV+ E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H +EALRRA K P Sbjct: 1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLP 161 The following BLAST results are available for this feature:
BLAST of FC931771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931771 ID=FC931771; Name=FC931771; organism=Citrus clementina; type=EST; length=672bpback to top |