FC931782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_CAEEL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 50/180 (27.78%), Postives = 84/180 (46.67%), Query Frame = 2 Query: 53 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQ-MQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 589 ++ H + V V + P+ R ++++ D+ VK+W + +L+ + GH V +V P G + AS D ++D++ + TL P ++V M F P L A G +S+K+WD I L +PE S +S+AWS DG+ + G D I V+ V+ Sbjct: 150 DDCHTDWVSTVRFSPSN--RDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--PGNDVINAMSFSPNRYWLCAAVG--SSIKIWDLEDKKEIEEL---KPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 2 Query: 119 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 613 L+++G+ D VK+W P+ + T GH V S+ G+ S SLD+ +RV+DV+T TL S M+ + V+G ++VK+WD T + TLS P T + +FV++ S DGT+ ++DV F+ +L Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVT------------SSDDGTVKLWDVKTGDFIRNL 1274
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: CIO1B_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-B OS=Salmo salar GN=ciao1b PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 68/252 (26.98%), Postives = 101/252 (40.08%), Query Frame = 2 Query: 47 SVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVS--------VAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW-----------DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF------DVTRAKF---LHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 +V HE V V W P+ LL T S D++V +W D+ N C+ VV+ V HP+ + AS S D+ V V+ + D ATLE S VW + FDP G LA + +VK+W A W + TLS + V +AW P +A D + VF D + F H + H V + + P + +L S SD+ + +++ Sbjct: 99 TVLEGHENEVKCVAWAPSGN----LLATCSRDKSVWIWEVDE-----ENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLA-SCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLS------------GFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNGEIAVWN 328 The following BLAST results are available for this feature:
BLAST of FC931782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931782 ID=FC931782; Name=FC931782; organism=Citrus clementina; type=EST; length=731bpback to top |