FC931782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 56/182 (30.77%), Postives = 88/182 (48.35%), Query Frame = 2 Query: 167 DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 +D LER GH + S+ P+G A+AS D+F+ +++ +A V +QF P G LA A +V+LW IP G K ++ + V SV +S DG+ +A S D +I V+ + R +FL+ L H VR +SP D R++ S S+D + ++D Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASA-SRDRTVRLW------------IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWD 172
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 57/211 (27.01%), Postives = 90/211 (42.65%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H+++V V + P+ LL +GS D+TV++W P+ H V SV G +AS D V+V+ + +L + V +F P G L V+ +VKLWD + + + FV V + P G IA MD T+ V+DV + L H + H V +L + P ++ ++SD T Sbjct: 60 HKDAVTCVNFSPSGH----LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYC-------------EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDST 252
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 58/236 (24.58%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 14 PPSQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 P K+ + S H S+ + + + +LTG D+ V ++ Q+ T GH V SV HPS + SAS D+ +R++ V + + + A S V + G L S+ + W D T ++ K TD++S + + PDG G+MD I ++D+ + + GH P+ S+ +S + L +A+DD+ V ++D Sbjct: 201 PEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLL----SSSDDQYWAFSDIQTGRVLT----------KVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE-NGYYLATAADDSSVKLWD 420
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 58/236 (24.58%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 14 PPSQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLW---DTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 P K+ + S H S+ + + + +LTG D+ V ++ Q+ T GH V SV HPS + SAS D+ +R++ V + + + A S V + G L S+ + W D T ++ K TD++S + + PDG G+MD I ++D+ + + GH P+ S+ +S + L +A+DD+ V ++D Sbjct: 201 PEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLL----SSSDDQYWAFSDIQTGRVLT----------KVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE-NGYYLATAADDSSVKLWD 420
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 56/175 (32.00%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 188 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 T H V +A HP+ + ASAS D+ V+++D + TL+ V + FDP+G +A ++KLWDTA + L D S V SV + PDG + S D TI V+ V+ + GH VR V S D R L SAS+D ++D Sbjct: 100 TLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATC-SSDLTLKLWDTAN-------QYTNVKTLHGHDHS-----VSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSE-DGRWLVSASNDQTSRIWD 260 HSP 2 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 51/182 (28.02%), Postives = 83/182 (45.60%), Query Frame = 2 Query: 119 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFD-VDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVD 661 LL + S D TVKLW + +ERT GH V+ V P G + A+ S D ++++D + ++ TL V ++F P G TL V+ ++++W ++ I T S ++V S DGR + S D T ++D + + L GH V V++PV+ Sbjct: 119 LLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETL-VSASRDKTIRVWQVSSGYCIKTF-------------SGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVN 286
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: NLE1_MOUSE (Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 113 PALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 580 P L++GS D T+ LW P +D + TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L TD V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWDVKAQKLA-------------TDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483 HSP 2 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 59/220 (26.82%), Postives = 96/220 (43.64%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLS-VAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 718 H +SV + W LL + S D T+K+WR D L RT GH V ++A + A + V D S+ L+ S + + +G V+G ++ LW A E KP + + + +++ V +SPD R +A S D +I ++D K+L L GH V + +S D R+L S S D+ + ++D + Sbjct: 245 HTQSVTCLRW-----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNL-VRGQGPERLVSGSDDFTLFLWSPA-------------EDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVK 444
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_CHLRE (Guanine nucleotide-binding protein subunit beta-like protein OS=Chlamydomonas reinhardtii GN=GBLP PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 586 H E V V + P T T P ++++G D+ VK+W + +L+ GH V +V P G + AS D ++D+ + +L+A + + F P L A +S+K+WD + +++ L RPE T K + + +S+AWS DG + G DG I V+ V Sbjct: 149 HTEWVSCVRFSPMT-TNP-IIVSGGWDKMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPDGSLCASGGKDGIAMLWDLAEGKRLYSLDA-GDVIHCLCFSPNRYWLCAA--TQSSIKIWDLESKSIVDDL---RPE-FNITSKKAQVPYCVSLAWSADGSTLYSGYTDGQIRVWAV 314
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_ARATH (Guanine nucleotide-binding protein subunit beta-like protein OS=Arabidopsis thaliana GN=ARCA PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 52/183 (28.42%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS---SSKKFVL---SVAWSPDGRRIACGSMDGTISVFDVTR 592 H + V V + P T +++ S D+TVK+W + +L T GH V +VA P G + AS D V ++D+ + +LEA S + + F P L A +K+WD + +++ L + + D S ++K+ V+ S+ WS DG + G DG I V+ + R Sbjct: 149 HRDWVSCVRFSP--NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAA--TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: CIAO1_SCHJA (Probable cytosolic iron-sulfur protein assembly protein OS=Schistosoma japonicum PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11 Identity = 61/212 (28.77%), Postives = 90/212 (42.45%), Query Frame = 2 Query: 20 SQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD---MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWD-------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEG 619 S + L S+E H V V W P+ L+ T D++V LW DD +Q H V SVA HP G + S S D+ + V+ ++D A L S VW+ +F P G LA + VKLW +++W IATLS + + + WSPD + +A D + ++ + A L H+ G Sbjct: 94 SAPEMEALVSLEG-HTSEVKCVAWCPSGH----LIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILA-SCSDDLCVKLWSWEGVCGKSSSWMCIATLS------------GYHTRTIFDLNWSPDSQLLASCGSDNRLCIYKMP-ANGLTHIGG 286
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 52/201 (25.87%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 122 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLV--YSPVDPRVLFSASDDTHVHMYDAE 718 L++ S D+T+KLW + +T GH V +P + S S D V++++V T + TL A + + F G +L V+G ++WD A+ + TL+ EG P V V +SP+G+ I ++D T+ ++D +R + L GH + +S + + S S+D V++++ + Sbjct: 96 LVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNG-SLIVSGSYDGLCRIWDAASGQCLRTLA---DEGNPP---------VSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQ 283 The following BLAST results are available for this feature:
BLAST of FC931782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931782 ID=FC931782; Name=FC931782; organism=Citrus clementina; type=EST; length=731bpback to top |