FC931782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 58/220 (26.36%), Postives = 89/220 (40.45%), Query Frame = 2 Query: 122 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP---------RPEG-----------LKPTDKSSSK---------KFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 L +GS+D T+ +W TGH V V PSG + AS S D VR++ + A + V + F G +L V +VK+W T + +L+ P+G +K DK+S + FV V + P G IA MD T+ V+D + L H + H V +L + P ++ ++SD T Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSL-VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDST 252 HSP 2 Score: 67.781 bits (164), Expect = 6.923e-11 Identity = 55/218 (25.23%), Postives = 93/218 (42.66%), Query Frame = 2 Query: 38 GLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDD 691 G +V AH +V +V + ++ L+T S D+TVK+W + + T H V P G + SAS D V+++D + I + V + F P GT +A AG + +VK+WD T L+ + V ++++ P G + S D T+ + D+ + L+ L GH P ++ +S SD+ Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQS----LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDARTHRLLQHYQL-------------HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 293
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: WD51A_HUMAN (WD repeat-containing protein 51A OS=Homo sapiens GN=WDR51A PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 57/211 (27.01%), Postives = 90/211 (42.65%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H+++V V + P+ LL +GS D+TV++W P+ H V SV G +AS D V+V+ + +L + V +F P G L V+ +VKLWD ++ + + FV V + P G IA MD T+ V+DV + L H + H V L + P ++ ++SD T Sbjct: 60 HKDAVTCVNFSPSGH----LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKSSRECVHSYC-------------EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDST 252
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PRP46_DEBHA (Pre-mRNA-splicing factor PRP46 OS=Debaryomyces hansenii GN=PRP46 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 60/219 (27.40%), Postives = 95/219 (43.38%), Query Frame = 2 Query: 14 PPSQMKFAGLKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVD-TNAS----IATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 655 P S ++ L+ + AH+ V + T P T +TGS D T+K+W L+ T TGH +GV S+A S S D V+ +D++ TN+S I ++ M P+ L GG + +++WD + I LS R + + S+A +I SMD TI ++D+ +A L H +RS+ P Sbjct: 104 PDSDSRWKLLRVMAGAHQGWVRSCTVDPVTNK---WFVTGSSDSTIKIWDLASSNLKATITGHIMGVRSLAVSSRYPYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPE-LDLLFTGGRDSVIRVWDLRSRTEIMVLSGHRSD-------------ITSIASQIGDPQIITSSMDATIRLWDIRKATTQLALTHHSKSIRSMAMHP 305
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PHIP_MOUSE (PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDP-----KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV--FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H SV+ VT+ + + TGS D VK+W DD +L T GH + +A + + A+ S D +RV+ + T A +A L+ + + +QF P K + G+ LWD T + P K T++ ++ ++S G +A GS D I V F + + + LE H V S+ +S R + + D T Sbjct: 182 HLSSVYCVTF----DRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKI-------NPRPTKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGT 388
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PHIP_HUMAN (PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDP-----KGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISV--FDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 H SV+ VT+ + + TGS D VK+W DD +L T GH + +A + + A+ S D +RV+ + T A +A L+ + + +QF P K + G+ LWD T + P K T++ ++ ++S G +A GS D I V F + + + LE H V S+ +S R + + D T Sbjct: 182 HLSSVYCVTF----DRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKI-------NPRPAKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGT 388
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 46/157 (29.30%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 113 PALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 580 P L++GS D T+ LW P +D + TGH + V P + ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L TD V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD-SRLLVSGSSDSTLKVWDVKAQKL-------------STDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11 Identity = 54/175 (30.86%), Postives = 72/175 (41.14%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 586 H VW V P + +GS D T +LW D R GH V V HP+ A+ S D VR++ S+ V + F P G LA A G +KLWD A+ L L TD + S+A+SPD IA SMD ++ V+D+ Sbjct: 383 HAYPVWDVDISPFS----LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASA-GEDQRLKLWDLASGTLFKELR-------GHTDS------ITSLAFSPDSGLIASASMDNSVRVWDI 539
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_TOBAC (Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana tabacum GN=ARCA PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11 Identity = 50/184 (27.17%), Postives = 91/184 (49.46%), Query Frame = 2 Query: 56 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGLKPTDKSSSKK----FVLSVAWSPDGRRIACGSMDGTISVFDVTR 592 ++H + V V + P +P ++ +GS D TVK+W + +L T GH V + A P G + AS D + ++D+ + +LE+ S + + F P L A +S+K+WD + +++ L + + E ++ ++S K + S++WS DG + G DG I V+ + R Sbjct: 147 DSHSDWVSCVRFSP-NNLQPTIV-SGSWDRTVKIWNLTNCKLRLTLAGHTGYVNTPAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLES-GSIIHSLCFSPNRYWLCAA--TESSIKIWDLESKSIVDDLKVDLKQESEMSSEGTASGKNKVIYCTSLSWSADGSTLFSGYTDGLIRVWGIDR 325
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_BRANA (Guanine nucleotide-binding protein subunit beta-like protein OS=Brassica napus GN=GB1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11 Identity = 52/183 (28.42%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS---SSKKFVL---SVAWSPDGRRIACGSMDGTISVFDVTR 592 H + V V + P T +++ S D+TVK+W + +L T GH V +VA P G + AS D V ++D+ + +LEA S + + F P L A +K+WD + ++ L + + +D S ++K+ V+ S+ WS DG + G DG I V+ + R Sbjct: 149 HRDWVSCVRFSP--NTLQPTIVSASCDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFTPNRYWLCAA--TEQGIKIWDLESKTVVEDLKVDLKAEAEKSDGSGTAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_NICPL (Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 50/184 (27.17%), Postives = 88/184 (47.83%), Query Frame = 2 Query: 56 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGLKPTDKSSSKK----FVLSVAWSPDGRRIACGSMDGTISVFDVTR 592 ++H + V V + P +P ++ +GS D TVK+W + +L T GH V + A P G + AS D + ++D+ + +LE+ S + + F P L A +S+K+WD + ++ L + + E + ++S K + S+ WS DG + G DG I V+ + R Sbjct: 147 DSHSDWVSCVRFSP-NNLQPTIV-SGSWDRTVKIWNLTNCKLRATLAGHTGYVNTTAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLES-GSIIHSLCFSPNRYWLCAA--TESSIKIWDLESKTIVDDLKVDLKQESEMSAEGTASGKNKVIYCTSLGWSADGSTLFSGYTDGLIRVWGIGR 325 The following BLAST results are available for this feature:
BLAST of FC931782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931782 ID=FC931782; Name=FC931782; organism=Citrus clementina; type=EST; length=731bpback to top |