FC931784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.283e-14 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 I + +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G+ VN Sbjct: 94 INTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVN 197 HSP 2 Score: 21.9422 bits (45), Expect = 1.283e-14 Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 299 VVKTSIGGNRIIGRLCVGNKNGLLLP 376 V + ++ + ++G V N NG+LLP Sbjct: 48 VARFTVARSPLLGIFTVVNDNGVLLP 73
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_HALLT (Translation initiation factor 6 OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=eif6 PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.667e-14 Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 3 Query: 411 LSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 701 ++A GN + ND+ A H DL RE+ I + LGV V R + VG+ +N G L HP ++ +L + L V GT+N G+ +IG+GL Sbjct: 96 INAAGNVVLANDYGAYVHPDLPRESIVTIRETLGVPVVRGDLGDVRTVGTAAVANNTGVLCHPKSTESELQAVEEALDVRADLGTINYGAPLIGSGL 192 HSP 2 Score: 36.965 bits (84), Expect = 1.667e-14 Identity = 23/76 (30.26%), Postives = 35/76 (46.05%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 R F S VGVF++ + LV E EL + T++GG +G L GN+NG+L+ T++ Sbjct: 3 RATFTGSSYVGVFARAIDDLLLVRPDVDEELADALGEELG--AEPLLTTVGGANTVGSLATGNENGVLVSARATER 76
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_STAMF (Translation initiation factor 6 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif6 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 6.168e-14 Identity = 33/99 (33.33%), Postives = 55/99 (55.56%), Query Frame = 3 Query: 414 SALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +ALGN + CN+ +A ++L+R+ I++ LGVE + I + GS +++GG++HP S ++ EL + +V TVN G I +GL N Sbjct: 102 TALGNILLCNNKACIAGSELERQELNKISEALGVEALYKDIMNLTIPGSLAVVTDKGGVIHPDISDDENRELKEIFKVAFERATVNSGIPFIKSGLIAN 200 HSP 2 Score: 33.4982 bits (75), Expect = 6.168e-14 Identity = 25/76 (32.89%), Postives = 35/76 (46.05%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 RL + +GV+ N+ LV S AE DV +V+T I + G L VGN NG++LP D+ Sbjct: 5 RLSLFGNPNIGVYVFANNSIALVPPSLSSGEKKVI-AETLDV-ELVETKIANTILNGVLVVGNDNGIILPRIILDE 78
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PYRAR (Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.175e-14 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + + +A+ N I + VAL L+ +++ADVLGVEV TIAGN LVGS ++RG LV P + EDL +L+ + GTVN+G + G+ VN Sbjct: 94 LNTKYTAISNLILAGNKVALVSPLLEPSVRKVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGVLVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVN 197 HSP 2 Score: 22.3274 bits (46), Expect = 6.175e-14 Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = 2 Query: 299 VVKTSIGGNRIIGRLCVGNKNGLLLP 376 V + ++ + ++G V N NG+LLP Sbjct: 48 VARLTVAKSPLLGIFTVVNDNGVLLP 73
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.014e-14 Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNI-LVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +NRGG+VHP S +++ L+++ V TVN G + AGL N Sbjct: 95 LEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVAN 199 HSP 2 Score: 30.8018 bits (68), Expect = 8.014e-14 Identity = 21/61 (34.43%), Postives = 28/61 (45.90%), Query Frame = 2 Query: 194 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLP 376 +GV+ N LV +E E L + V++T I I G + GN NGLLLP Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLP 71
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METLZ (Translation initiation factor 6 OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eif6 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.018e-14 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 405 ERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLL---QVPLVAGTVNRGSEVIGAGLTVN 710 E ++A GN I ND A+ H D+ E++AD L V++ + AG VG C+ +N G L+ ++ E++++L + V + G+VN GS +IG GL +N Sbjct: 93 EEMNAAGNVILTNDSFAVVHPDMSSAMREMVADFLKVKIIPMSFAGVGTVGMTCACTNTGVLLPARSTPEEIEKLERSIDDANVAIGTGSVNMGSGLIGTGLLIN 197 HSP 2 Score: 31.187 bits (69), Expect = 8.018e-14 Identity = 19/72 (26.39%), Postives = 34/72 (47.22%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLL 373 M L +GV++++ +V + + F AE DV V++T + G+ +IG L GN G ++ Sbjct: 1 MDPTLSLNGDPNIGVYARVFEDLAVVPVEAPKEFRDKI-AEALDV-EVIETFVQGSSVIGLLLTGNSRGFVV 70
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METAC (Translation initiation factor 6 OS=Methanosarcina acetivorans GN=eif6 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 318 VATGLSGGFVLV--TKMGFSCHTQPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 ++ G S GF+L + T + +RL+A+GN + ND AL H DL + E IA L V+V+R TIAG VG +N+G LVHP + + + L + P+ GT N G++++G+GL N Sbjct: 60 LSRGNSNGFMLPYGARAEMQRFTDIPVGILPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEREVLEKIFGFPVNIGTTNFGTQMLGSGLLAN 192
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_CENSY (Translation initiation factor 6 OS=Cenarchaeum symbiosum GN=eif6 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 3 Query: 375 HTQPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 HT ++ + +ALGN I+ ND + RE IIAD LG+EV ++ IAG VG+ ++ GG++HP T ED+ +S ++ V + T+N G + +GL N Sbjct: 86 HTDLNVVVLDTKFTALGNMISVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGAMMVATSGGGIIHPETDGEDVKRISEVMGVHMEPATINGGIPFVSSGLLAN 197
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METJA (Translation initiation factor 6 OS=Methanocaldococcus jannaschii GN=eif6 PE=1 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 6.495e-13 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSEVIGAGLTVN 710 I+ + +ALGN I ND AL +L ++ ++ I D L VEV TIA VGS +N+G L HP ++L+ L +L +V + GT N+G+ +GA + N Sbjct: 100 IKSKNTALGNLILTNDKGALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIAN 203 HSP 2 Score: 36.965 bits (84), Expect = 6.495e-13 Identity = 25/81 (30.86%), Postives = 41/81 (50.62%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPV--VKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQ 394 M R F +GV + T L+ I + + E+++V+ ++T+IGG+ ++G L V NK GLLLP D+ Sbjct: 3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVN----EVSEVLETKCLQTNIGGSSLVGSLSVANKYGLLLPKIVEDE 79
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 49/150 (32.67%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 300 LLKHQLVATGLSGGFVLVTKMGFSCHTQPQTK-------------RIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 +LK + + L+G + GF Q + RI ER +A+GN + ND+ A+A L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++ + L V GTVN G +IGA N Sbjct: 46 VLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAVRIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVAN 195 The following BLAST results are available for this feature:
BLAST of FC931784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931784 ID=FC931784; Name=FC931784; organism=Citrus clementina; type=EST; length=712bpback to top |