FC931785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_SPOFR (40S ribosomal protein S6 OS=Spodoptera frugiperda GN=RpS6 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57 Identity = 120/209 (57.42%), Postives = 146/209 (69.86%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS----KAPKIQRLVTPLTLQRKRARIAEKKQRIAK 689 MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV +I GG DKQGFPMKQGVLT RVRLL+ +G C+ CIV +LSVL LVIV+KGE ++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV +R K GK+ + KAPKIQRLVTP+ LQR+R R+A KK+R+AK Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAK 205
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_MANSE (40S ribosomal protein S6 OS=Manduca sexta GN=RpS6 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.587e-57 Identity = 119/216 (55.09%), Postives = 149/216 (68.98%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS----KAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAAE 710 MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV ++ GG DKQGFPMKQGVLT RVRLL+ +G C+ CIV +LSVL LVIV+KGE ++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV + K GK+ + KAPKIQRLVTP+ LQR+R R+A KK+R+AK ++ A+ Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKSAEAD 212
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.685e-57 Identity = 121/212 (57.08%), Postives = 149/212 (70.28%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTLQRKRARIAEKKQRI-AKGQAEA 704 MK N++ P TG QK E+ DD KLR F+DKR+ E++ D LG+E+KGYVFKI GG DKQGFPMKQGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT R GPKRAS IRKL+NL+KEDDVR+YV +R K GKK +KAPKIQRL+TP+ LQRKR R+A KK+R+ ++ +AEA Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEA 208
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_YEAST (40S ribosomal protein S6 OS=Saccharomyces cerevisiae GN=RPS6A PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55 Identity = 122/211 (57.82%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 MK NI+ P G QK EIDD+ ++R FFDKRI QEV G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P R++LLL + C+ IV PDL+VL LVIVKKGE +L GLTDT P+ GPKRA+ IRK F LSKEDDVR +V R TK K +KAPKIQRLVTP LQRKR + A K R A+ Q EAA Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQGFPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRHQRA-LKVRNAQAQREAA 205
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.848e-54 Identity = 112/211 (53.08%), Postives = 146/211 (69.19%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 M+ N A P TG QK E+D+++KLR FF+KR+SQEV+ DALG+E+KGYV +I GG DKQGFPMKQG+LT GRVRLLL +G C+ CIV ++S L+LVIVKKG+ ++ GLTD+ PR GPKRASKIRKLFNL+K DDV KYV T+ +TF K + APKIQRL+TP + RK+ + +K+ + K + +AA Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRDDAA 207
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_CANGA (40S ribosomal protein S6 OS=Candida glabrata GN=RPS6A PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54 Identity = 117/211 (55.45%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 MK NIA P G QK +E+DD+ ++R F+DKRI QE+ G+A+G+EFKGY FKI GG DKQGFPMKQGVL P RV+LLL +G C+ IV PDL+VL+LVIVKKGE +L G+TD P+ GPKRA+ IRK F L+KEDDVR +V R TK K +KAPKIQRLVTP LQRKR + K R A+ Q EAA Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQGFPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRYQ-RNLKVRNAQAQREAA 205
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_YARLI (40S ribosomal protein S6 OS=Yarrowia lipolytica GN=RPS6 PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54 Identity = 115/211 (54.50%), Postives = 144/211 (68.25%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 MK NIA P G QK ++I+D+ ++R F++KR+ QEV D LG+EFKGYV KI GG DKQGFPMKQGV+ P RVRLLL + + C+ CIVS DLSVL++VIVK+G+ D+ GLT PR GPKRA+ IRKLF LSKEDDVR+YV RR TTK+GK +KAPKIQRL+TP L K A++ EKK + + +AA Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQGFPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRREVTTKSGKTYTKAPKIQRLITPRRLAHK-AQLREKKVKAIQASKDAA 206
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_DEBHA (40S ribosomal protein S6 OS=Debaryomyces hansenii GN=RPS6 PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54 Identity = 112/212 (52.83%), Postives = 144/212 (67.92%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAAE 710 MK NI+ P G QK ++I+D+ KLR F++KR+ QEV GD +G+EFKGY+F+I GG DKQGFPMKQGV+ P RV+LLL +G C+ CIV+ DL+VL L +VK+G+ D+ GLTDT P+ GPKRA+ IRK F L+KEDDVR++V R K KK +KAPKIQRLVTP TLQRKRA A+K + + + AAE Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQGFPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV---VRREVVKGDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAE 207
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_KLUMA (40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.842e-53 Identity = 117/211 (55.45%), Postives = 143/211 (67.77%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 MK NI+ P G QK +EIDD+ ++R F+DKRI QEV G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT C+ IV PDL+VL LVIVKKG+ ++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKIQRLVTP LQRKR + A K + A+ Q EAA Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKN-AQAQREAA 205
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_ASHGO (40S ribosomal protein S6 OS=Ashbya gossypii GN=RPS6 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.560e-52 Identity = 112/211 (53.08%), Postives = 142/211 (67.30%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 MK NI+ P G QK +E+DD+ ++R F+DKRI QEV+G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT C+ IV PDL+VL L+I KKG+ ++ G+T+ P+ GPKRA+ IRK F L+K+DDVR +V R K K +KAPKIQRLVTP LQRKR + A K R A+ Q EAA Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV---IRREVVKGDKTYTKAPKIQRLVTPQRLQRKRHQRA-LKVRNAQAQREAA 205 The following BLAST results are available for this feature:
BLAST of FC931785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931785 ID=FC931785; Name=FC931785; organism=Citrus clementina; type=EST; length=712bpback to top |