FC931788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.301e-43 Identity = 96/174 (55.17%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 M++++WFY +LASLGL K AK+LFLGLDNAGKTTLLHMLK++R+ PT +PTSEEL IG +F FDLGGHQ ARR+W ERF ESK VPFLVLGNKID P A SE+ELR+ LGL TTGKGKV L +RP+EVFM S Sbjct: 1 MWIINWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCS 171
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_CANAL (Small COPII coat GTPase SAR1 OS=Candida albicans GN=SAR1 PE=3 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.229e-43 Identity = 93/174 (53.45%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 M++ DWF +L+SLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ERFAESK VPF++LGNKID+P A E EL+ LGL N TTGK L + RP+EVFM S Sbjct: 1 MWIFDWFQDILSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERFAESKAELESLFRIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN-TTGKDTGKLPE-GTRPIEVFMVS 172
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.075e-42 Identity = 96/174 (55.17%), Postives = 110/174 (63.22%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 M+L DWF VLASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ERFAESK +VPFL+LGNKID A E EL+ LGL N TTGK L + RP+EVFM S Sbjct: 1 MWLFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN-TTGKDTGKLPEGQ-RPIEVFMVS 172
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.833e-42 Identity = 96/171 (56.14%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVF 684 M++L+WF VLASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEELSIG ++F FDLGGH+ ARRVW ERF ES+ VP LVLGNKID A SE ELR+ LGL TTGK KV L + RPLEVF Sbjct: 1 MWVLNWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMT-TTGKDKVQLVEGQ-RPLEVF 169
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.833e-42 Identity = 96/174 (55.17%), Postives = 115/174 (66.09%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MFL DWF+ VL+ LGL+ K AKILFLGLDNAGKTTLL +LKD RL + PT +PTSEEL++G I+FKAFDLGGH+ ARR+W +RF ESKK NVPFL+LGNK+DI + SEE+ R LGL+ TTGKGK L + VRP+EVFM S Sbjct: 1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGN-TSEEKFRASLGLTQ-TTGKGKTTL--NGVRPIEVFMCS 170
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 94/174 (54.02%), Postives = 113/174 (64.94%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 M+L++WFY +LASLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W E F ESK VPFL+LGNKID P A SE+++R+ LGL TTGKGKV L +RP+EVFM S Sbjct: 1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCS 171
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.966e-42 Identity = 94/177 (53.11%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 175 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 F+ DW Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFM S Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCS 179
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42 Identity = 94/177 (53.11%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 175 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 F+ DW Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFM S Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCS 179
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42 Identity = 94/177 (53.11%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 175 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 F+ DW Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFM S Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCS 179
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42 Identity = 94/177 (53.11%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 175 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 F+ DW Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFM S Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARPLEVFMCS 179 The following BLAST results are available for this feature:
BLAST of FC931788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931788 ID=FC931788; Name=FC931788; organism=Citrus clementina; type=EST; length=694bpback to top |