FC931790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_MOUSE (60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKL+ DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_MACFA (60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKL+ DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKL+ DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.144e-46 Identity = 92/165 (55.76%), Postives = 117/165 (70.91%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M L QKRLA+SV+ CGK+K+WLDPNE NEI+NANSRQ IRKL+ DGLIIRKPVT+HSRA R+ ARR GRH G+GKRKGT +ARMP + + KID+H+YH LY KGN FK+KR L+EHI K KA++AR ++L ++ +A+R+K Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.346e-46 Identity = 90/166 (54.22%), Postives = 117/166 (70.48%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAKN 542 MV+L QKRLAASV+ CGK K+WLDPNE ++IS ANSRQ IRKLV DG IIRKP +HSR+ AR++ A+ GRH G GKRKGT++AR+P++ KIDKH+YH++Y KGN FK+KR L+E I K+KAE+AR++ L ++ +AKRAKN Sbjct: 1 MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.413e-46 Identity = 90/165 (54.55%), Postives = 116/165 (70.30%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAK 539 M +L QKRLAASV+ CGK+K+WLDPNE+NEI+N NSRQ IRKL+ DGLII+KPV +HSR R+ EARR GRH G GKRKGT +ARMP++ + KID+HLYH+LY KGN FK+KR L+E+I K KAE+ R ++L ++ +A+R K Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQK 165
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.681e-46 Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAKN 542 M NL QKRLA++V+ CGK ++WLDPNE++EIS ANSRQ+IR+LV+DGLIIRKPVT+HSR ARE EARR GRH G GKR+GT +ARMP + A K+DKHLYHELY +KGN FK+K+ L+E+I K K E R + L ++ A+R KN Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKN 166
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.481e-42 Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQKAKAERARDRVLKEEMDAKRAKN 542 MV+L QKRLAAS++ CGK ++W+DPNE+ +++ ANSR +R+L++ G I+RKPV +HSR+ ARE N A+R GRHRG G R GT++AR+PS+ A KIDKH Y ELY +KGN FK+KR L+E+I K+K E+ R+++++++ A+R KN Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKN 166
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_PYRHO (50S ribosomal protein L19e OS=Pyrococcus horikoshii GN=rpl19e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 51/138 (36.96%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRAL 458 M L Q+R+AA ++ CG+ ++W+DP +++E+++A +R+ IR+L+ +G+I +KP+ SR AR +E ++ GRHRG G RKG K ARM + KID+ Y LY +KG FK+K L Sbjct: 1 MNTLKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_ARCFU (50S ribosomal protein L19e OS=Archaeoglobus fulgidus GN=rpl19e PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.837e-21 Identity = 54/147 (36.73%), Postives = 82/147 (55.78%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFK---HKRALVEHIQK 476 +++L+ Q+RLAASV+ CG+ ++W DP + +I+ A ++Q IR+L+ G+I RKPV SRA + +R GR RG G RKG K ARMP + A G +D+ Y LY +KG F+ H + VE +++ Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRSVAHLKIYVEQMKR 149 The following BLAST results are available for this feature:
BLAST of FC931790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931790 ID=FC931790; Name=FC931790; organism=Citrus clementina; type=EST; length=673bpback to top |