FC931791

Overview
NameFC931791
Unique NameFC931791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931791 vs. ExPASy Swiss-Prot
Match: MCA6_ARATH (Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20
Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 3
Query:  288 KRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVD-GYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDAC 710
            K+AL++G++Y  T  EL+GC+ND R M+  L  R+ F E +I ML + D   +K PT  N+R AL  L++  + GD L  H+SGHG++     GE+ D GYDE + P D     +I DD+    LV  +P+   +  I D+C
Sbjct:    3 KKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSSIK-PTGKNIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSD---MNLITDDDFR-DLVDMVPKDCPITIISDSC 139          
BLAST of FC931791 vs. ExPASy Swiss-Prot
Match: MCA7_ARATH (Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20
Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 3
Query:  288 KRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVD-GYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDAC 710
            KRAL++G++Y  T  EL+GC+ND   M   L +RF F E  I +L + D +   +PT  N+R AL  LI+  + GD L  H+SGHG++     GEE D G+DE + P D      I DD+    LV  +P G ++  + D+C
Sbjct:    3 KRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTD-ESYTQPTGKNIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLNP---IPDDDFR-DLVEQVPEGCQITIVSDSC 139          
BLAST of FC931791 vs. ExPASy Swiss-Prot
Match: MCA4_ARATH (Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 54/142 (38.03%), Postives = 83/142 (58.45%), Query Frame = 3
Query:  288 KRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVD-GYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDAC 710
            K+A+++G++Y  T  EL+GC+ND R M   L  R+ F E +I +L + D +   +PT  N+R AL  L++    GD L+ H+SGHG++     GE+ D G+DE + P D     +I DD+    LV  +P G R+  I D+C
Sbjct:    3 KKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTD-ESSTQPTGKNIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCD---MNLITDDDFR-DLVDKVPPGCRMTIISDSC 139          
BLAST of FC931791 vs. ExPASy Swiss-Prot
Match: MCA9_ARATH (Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  285 RKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQ--PGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDAC 710
            ++ A++VG +Y +T +EL GCIND   MK  + +RF F +  I +LT+E P+   +PT  N++ AL  ++   Q   GD L FH+SGHG++  +         DE + P DF     ++ D     LV  LP+G     I D+C
Sbjct:    9 KRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDE-PESKVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDEAIVPCDFN----LITDVDFRELVNQLPKGTSFTMISDSC 147          
BLAST of FC931791 vs. ExPASy Swiss-Prot
Match: MCA8_ARATH (Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 3
Query:  288 KRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQ--QRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDAC 710
            K+AL++G++Y  T  EL+GC+ND   M+  L   + F    IV++ + D   + +PT  N+   L  LI   Q GD L+FH+SGHG++      + E+  G+DE + P D      ++ D+    +V  +  G +L  I D+C
Sbjct:    3 KKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSCI-QPTGKNICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMN----LIKDQQFREMVSRVKEGCQLTIISDSC 140          
The following BLAST results are available for this feature:
BLAST of FC931791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MCA6_ARATH2.056e-2039.44Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1... [more]
MCA7_ARATH5.982e-2039.44Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1... [more]
MCA4_ARATH1.333e-1938.03Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1... [more]
MCA9_ARATH4.740e-1735.42Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1... [more]
MCA8_ARATH6.406e-1432.87Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC34201C03EF PostHarveN Citrus clementina cDNA clone C34201C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931791 ID=FC931791; Name=FC931791; organism=Citrus clementina; type=EST; length=710bp
GAATTACTTTTCTCCGTCTTAAAGACAAGACCAACAACGCCACGATGTTA
ATGCTCGTGGACTGTTCCAAATGCCGCACGACGTTACAGCTCCCGCCTGG
GGCCCAGTCAATCCGCTGCGCCATCTGCCAAGCCATCACCCACATCGCCG
ACCCTCGATCCGGCCCTCCTCCTCCCTCCTCCTCCCCCTCCTCCTCTTAT
CAGCCCGGTCACGTGCCTCCTTCCGCTGTCGCTCCCTCGCCTTACAACCA
CGCGCCCCCCGGCCAACCTCCCCACGCGCAGGGCCGCAAGAGAGCCTTGA
TCGTCGGCGTTTCCTATAGGCACACCAATCATGAGCTCAAGGGTTGTATC
AACGACGCCAGGTGCATGAAGTACATGCTCACCAACCGCTTTAAGTTCCC
TGAATCCTCCATCGTCATGCTCACCGAAGAAGATCCCGATCCCTTAAAGC
GGCCTACCAAATATAACATGAGAATGGCGTTGTATTGGCTTATTCAAGGT
TGTCAACCTGGAGACTCACTGCTTTTCCATTTTTCTGGTCATGGTTCACA
ACAGAGGAATTACAATGGTGAGGAGGTTGATGGATATGATGAAACTCTTT
GTCCAGTGGATTTCGAAACCCAAGGAATGATTGTCGATGATGAGATCAAC
GCAACTCTAGTCCGGCCTCTTCCTCGTGGGGCCAGGCTTCATGCAATTAT
AGATGCTTGT
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