FC931792

Overview
NameFC931792
Unique NameFC931792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 44/147 (29.93%), Postives = 67/147 (45.58%), Query Frame = 3
Query:  171 EVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGY 605
            +V V+++Y  +CH+D++          YP V GHE VGVV   G EVK+ K G+ V +   +G C+ C NC   M   C K     N +  D T                  ++  MV+D  +VV++  ++    A+ L C   T Y
Sbjct:   36 DVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQ-------------GGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVY 169          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 44/147 (29.93%), Postives = 67/147 (45.58%), Query Frame = 3
Query:  171 EVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGY 605
            +V V+++Y  +CH+D++          YP V GHE VGVV   G EVK+ K G+ V +   +G C+ C NC   M   C K     N +  D T                  ++  MV+D  +VV++  ++    A+ L C   T Y
Sbjct:   36 DVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQ-------------GGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVY 169          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 40/147 (27.21%), Postives = 70/147 (47.62%), Query Frame = 3
Query:  171 EVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGY 605
            +V  K+LY  +CH+D+      +   +YP + GHE VGVV   G++V+  K GD V +   +G C+ CE+C + + N C K  +       D T              +   +S+ MV++ ++ V++  ++     + L C   T Y
Sbjct:   40 DVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGT-------------LTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVY 173          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 55/188 (29.26%), Postives = 84/188 (44.68%), Query Frame = 3
Query:   57 AILTMSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGA 611
            +I T++ S   T K V+ +  G  L+ ++I V  PK  E+ + + Y+ VCHTD+   +G +P P   P V GHEG GVV + G+ VK    GD   I    G C  CE C  E++N        L+G   D                   ++ +Y   DA    ++    D ++ + + C   T Y A
Sbjct:   21 SIRTLATSVPETQKGVIFYENGGKLEYKDIPVPKPKPNEILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYC--ELSNESNCPDADLSGYTHD------------------GSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKA 188          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 45/147 (30.61%), Postives = 64/147 (43.54%), Query Frame = 3
Query:  171 EVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGY 605
            +V +K++   VCHTDI           YP V GHE VG V   G +V   K GD+V +   +G CK C  C SE+   C K   + N +  D                    ++E MV+   +VV++   + P  A+ L C   T Y
Sbjct:   36 DVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQ-------------GGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVY 169          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 3
Query:  129 LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGA 611
            + +E+ ++   K  E  V+  Y  VCHTD+         +    LGHEG+G V    ++V+ +K GD V   ++ E C  CE CT+    LC     A  G  +D                     +E +++ A+Y VKV   +DP+ AS ++C   T Y A
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNA--GYTVDGAM------------------AEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKA 153          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 3
Query:  129 LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGA 611
            + +E+ ++   K  E  V+  Y  VCHTD+         +    LGHEG+G V    ++V+ +K GD V   ++ E C  CE CT+    LC     A  G  +D                     +E +++ A+Y VKV   +DP+ AS ++C   T Y A
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNA--GYTVDGAM------------------AEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKA 153          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 3
Query:  129 LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGA 611
            + +E+ ++   K  E  V+  Y  VCHTD+         +    LGHEG+G V    ++V+ +K GD V   ++ E C  CE CT+    LC     A  G  +D                     +E +++ A+Y VKV   +DP+ AS ++C   T Y A
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNA--GYTVDGAM------------------AEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKA 153          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 3
Query:  129 LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGA 611
            + +E+ ++   K  E  V+  Y  VCHTD+         +    LGHEG+G V    ++V+ +K GD V   ++ E C  CE CT+    LC     A  G  +D                     +E +++ A+Y VKV   +DP+ AS ++C   T Y A
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNA--GYTVDGAM------------------AEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKA 153          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH_STAAM (Alcohol dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 47/162 (29.01%), Postives = 73/162 (45.06%), Query Frame = 3
Query:  129 LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGA 611
            + +E+ ++   K  E  V+  Y  VCHTD+         +    LGHEG+G V    ++V+ +K GD V   ++ E C  CE CT+    LC     A  G  +D                     +E +++ A+Y VKV   +DP+ AS ++C   T Y A
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNA--GYTVDGAM------------------AEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKA 153          
The following BLAST results are available for this feature:
BLAST of FC931792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
CADH7_PICAB1.314e-1129.93Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB1.314e-1129.93Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
MTDH_MESCR1.716e-1127.21Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
ADH3_KLULA1.716e-1129.26Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
CADH_POPDE2.241e-1130.61Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
ADH_STAAW2.927e-1129.01Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS2.927e-1129.01Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAR2.927e-1129.01Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN2.927e-1129.01Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAM2.927e-1129.01Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionC34201C04EF PostHarveN Citrus clementina cDNA clone C34201C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931792 ID=FC931792; Name=FC931792; organism=Citrus clementina; type=EST; length=704bp
GATGCAGAGCTCATCTCCTTATCGACAGTTTGAAATTCGAGGCTGCAAAA
TCTACAGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGC
TGTGGTATGTTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAG
TAGAGCCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGT
GTTTGTCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTTTA
TCCTCGTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGCTGGGG
ATGAAGTGAAAGAAGTGAAAGAAGGAGATATTGTGATTCCAACTTATATT
GGAGAATGTAAAGAATGTGAAAATTGCACATCAGAAATGACCAATTTATG
CCTAAAATATCCAATAGCACTGAACGGTTTAATGCTTGATAGCACTTCAA
GAATGTCCGTAAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACT
TGGTCTGAATATATGGTCATCGATGCCAATTATGTAGTCAAAGTTGATCC
AAGCATTGATCCCTCGGATGCTAGCTTCCTTTCATGTGAATTTACAACTG
GTTATGGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTT
GCTGTTTTAGGGCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAG
GATG
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