FC931792

Overview
NameFC931792
Unique NameFC931792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14390 contig Ccv1_Contig14390:12..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 3
Query:   99 AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQ 470
            A V   +G PL  ++I V  P   ++ VK+ Y+ VCHTD+    G +P P+  P V GHEG G+V + G+ V E + GD   I    G C ECE C      LC +    L+G  +D T +    G+
Sbjct:    9 AQVAEKVGGPLVYKQIPVPKPGPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCAR--AQLSGYTVDGTFQQYALGK 133          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11
Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 3
Query:   96 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLC 401
            KAV  +   +PL+  +I    P   +V++++ Y  VCH+D+      +   +YP V GHE VG V + GD+V++   GD+V +   +  CK CE C   + N C
Sbjct:    4 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC 107          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11
Identity = 42/147 (28.57%), Postives = 69/147 (46.94%), Query Frame = 3
Query:  171 EVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGY 605
            +VR K+L+  +CHTD+ +    +    YP V GHE VGVV   G +VK+   GD V   Y+ G C+ C++C     N C K  +       D T              +   +S++MV   ++++++  ++    A+ L C   T Y
Sbjct:   35 DVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDT-------------MTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVY 168          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11
Identity = 62/201 (30.85%), Postives = 90/201 (44.78%), Query Frame = 3
Query:   51 STAILTMSNSQAI--TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGAAWKEAKVE 635
            S  IL + ++ AI  T K V+ +     L  ++I V  PK  E+ + + Y+ VCHTD+    G +P P+  P V GHEG GVV   G  VK  K GD+  I    G C  CE C S   + C   P A L+G   D                   ++ ++   DA    K+    D ++ + + C   T Y  A KEA ++
Sbjct:   18 SRNILRLQSTAAIPKTQKGVIFYENKGKLHYKDIPVPEPKPNEILINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNC---PDADLSGYTHD------------------GSFQQFATADAIQAAKIQQGTDLAEVAPILCAGVTVY-KALKEADLK 196          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 49/175 (28.00%), Postives = 73/175 (41.71%), Query Frame = 3
Query:   96 KAVVCWGLGEPLKVEEIQVEPPKST---EVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGY 605
            K  + W   +P  V        ++T   +V VK+LY  +CHTD+           YP V GHE VG V   G +V + K GD V +   +G C+ C  C  ++   C K     N +  D                    +++ MV+D  +VVK+   + P  A+ L C   T Y
Sbjct:    8 KTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQ-------------GGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVY 169          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 54/173 (31.21%), Postives = 75/173 (43.35%), Query Frame = 3
Query:  123 EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGAAWKEAKV 632
            E +K EE+ V  P   EV V + Y  VCHTD+   +G +P P   P + GHEG GVV   G  V  +K GD V +      C  CE C      +C    I L+G  +D                   T+  Y + +A +   +  S+    A+ + C   T Y  A KE+KV
Sbjct:   19 ENVKFEEVPVAEPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPH--IQLSGYTVD------------------GTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCY-RALKESKV 170          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 3
Query:   87 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLC 401
            +T  A V    G+PL +EE+ V  P   +V +K     VCHTD+  ++G +P  P  P + GHEGVG V   G EV  +KEGD V +P     C  C  C +    LC
Sbjct:    1 MTMTAAVVREFGKPLVIEEVPVPQPGPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC 108          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 3
Query:   90 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL---YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTN 395
            T K V+ +  G  L  ++I V  PKS E+ + + Y+ VCHTD+   +G   PL    P V GHEG GVV + GD VK  K GD+  I    G C  CE C  E++N
Sbjct:    6 TQKGVIFYENGGQLYYKDIPVPKPKSNELLINVKYSGVCHTDLHAWKG-DWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEEC--ELSN 108          
BLAST of FC931792 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 56/185 (30.27%), Postives = 85/185 (45.95%), Query Frame = 3
Query:   90 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FP-APLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCEFTTGYGAAWKEAKVE 635
            T KAV+    G  L+ ++I V  PK+ E+ + + Y+ VCHTD+   +G +P A   P V GHEG GVV + G+ VK  K GD     ++ G C  CE C S     C +    L+G   D                   ++ +Y   DA    ++    D ++ + + C   T Y  A K A++E
Sbjct:    6 TQKAVIFETNGGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAE--ADLSGYTHD------------------GSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVY-KALKTAELE 169          
The following BLAST results are available for this feature:
BLAST of FC931792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
ADH1_EMENI3.823e-1136.22Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
YAHK_ECOLI4.993e-1133.65Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CADH7_ARATH4.993e-1128.57Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
ADH3_YEAST4.993e-1130.85Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
CADH1_TOBAC6.521e-1128.00Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
ADH_SCHPO6.521e-1131.21Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADHA_RHIME8.517e-1138.89Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH2_KLUMA8.517e-1141.51Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH2_CANAL8.517e-1130.27Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionC34201C04EF PostHarveN Citrus clementina cDNA clone C34201C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931792 ID=FC931792; Name=FC931792; organism=Citrus clementina; type=EST; length=704bp
GATGCAGAGCTCATCTCCTTATCGACAGTTTGAAATTCGAGGCTGCAAAA
TCTACAGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGC
TGTGGTATGTTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAG
TAGAGCCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGT
GTTTGTCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTTTA
TCCTCGTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGCTGGGG
ATGAAGTGAAAGAAGTGAAAGAAGGAGATATTGTGATTCCAACTTATATT
GGAGAATGTAAAGAATGTGAAAATTGCACATCAGAAATGACCAATTTATG
CCTAAAATATCCAATAGCACTGAACGGTTTAATGCTTGATAGCACTTCAA
GAATGTCCGTAAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACT
TGGTCTGAATATATGGTCATCGATGCCAATTATGTAGTCAAAGTTGATCC
AAGCATTGATCCCTCGGATGCTAGCTTCCTTTCATGTGAATTTACAACTG
GTTATGGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTT
GCTGTTTTAGGGCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAG
GATG
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