FC931793

Overview
NameFC931793
Unique NameFC931793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.927e-43
Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDTTLLIHEGVKAE 588
            +++ V D+  ADFGR EI +AE EMPGLM+CR EFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGD T+ I  G +AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRTEFGQTKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.927e-43
Identity = 88/147 (59.86%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDTTLLIHE 573
            +SV        +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDH              WKGET +EYWWC E+ + +G   GP++I+DDGGD T  IHE
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMILDDGGDLTAYIHE 146          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.927e-43
Identity = 88/147 (59.86%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  133 LSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDTTLLIHE 573
            +SV        +KVKDLSQA++GR EI LAE EMPGLMA R E+   +P  GA+I GSLHMTIQTAVLIETLT LGAEVRW SCNIFSTQDH              WKGET +EYWWC E+ + +G   GP++I+DDGGD T  IHE
Sbjct:    1 MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFG-DKGPNMILDDGGDLTAYIHE 146          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 85/156 (54.49%), Postives = 106/156 (67.95%), Query Frame = 1
Query:  124 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEE 591
            A A +  +    +++ + D+  ADFGR E+ +AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH               KGETL+EYW  T   L+WG GG P++I+DDGGD T L+  G KAE+
Sbjct:    3 ATAAATAELQVAKDYVIADIGLADFGRKELNIAETEMPGLMALRAKYGKDKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAMAAGGIPVFAVKGETLEEYWDYTHSILEWGDGGTPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 84/144 (58.33%), Postives = 103/144 (71.53%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEE 591
            +++ V D+  A +GR EI +AE EMPGLMA R EF  +QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  DW  GG P++I+DDGGD TLL+H G +AE+
Sbjct:    9 QDYIVADIGLAGWGRKEIAIAETEMPGLMAIRDEFAAAQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFDWADGGTPNMILDDGGDATLLLHLGARAEK 152          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 91/178 (51.12%), Postives = 111/178 (62.36%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 672
            +FKV DLS A+ GR +I LAE EMPGLM  R E+   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFSTQD                       WKGETL EYWWC  +   W  G  P++I+DDGGD T+ +  G +    YEK G +P P + D+ E+   L ++R
Sbjct:    6 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRREYAEEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGDGTPEDPQGVPVFAWKGETLDEYWWCINQIFSW-EGELPNMILDDGGDATMAVIRGRE----YEKAGVVPQPEANDSDEYIAFLGMLR 178          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.011e-42
Identity = 89/180 (49.44%), Postives = 118/180 (65.56%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 672
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGD TLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_XYLF2 (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M23) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.011e-42
Identity = 89/180 (49.44%), Postives = 118/180 (65.56%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 672
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGD TLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.320e-42
Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDTTLLIHEGVKAEEIYEKTGKLPDPASTDNAE 645
            +++ + DLS AD+GR EI +AE EMP LMA R E+  +QP KGA++TGSLHMTIQTAVL+ETL ALGAEVRW SCNIFSTQDH               KGE+L+EYW  T +  D+GP G    GP++I+DDGGD TLL+H G +AE   +    L +P S +  E
Sbjct:   10 QDYAIADLSLADWGRKEIRIAESEMPALMAIREEYAKTQPLKGARVTGSLHMTIQTAVLVETLQALGAEVRWASCNIFSTQDHAAAALVQAGTPVFAHKGESLKEYWDFTHRIFDFGPAGSDHEGPNMILDDGGDATLLMHLGKRAE---KDASVLANPQSEEERE 172          
BLAST of FC931793 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.724e-42
Identity = 89/180 (49.44%), Postives = 117/180 (65.00%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 672
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGD TLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
The following BLAST results are available for this feature:
BLAST of FC931793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_RHIL35.927e-4358.74Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_LEPIN5.927e-4359.86Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC5.927e-4359.86Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_SYNS37.741e-4354.49Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RALME7.741e-4358.33Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_COREF7.741e-4351.12Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_XYLFT1.011e-4249.44Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_XYLF21.011e-4249.44Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_MYXXD1.320e-4253.61Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]
SAHH_XYLFM1.724e-4249.44Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34201C05EF PostHarveN Citrus clementina cDNA clone C34201C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931793 ID=FC931793; Name=FC931793; organism=Citrus clementina; type=EST; length=674bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACACCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCA
GATTGTTTTGACTATCATTAGAGA
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