FC931797

Overview
NameFC931797
Unique NameFC931797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: CSKP_RAT (Peripheral plasma membrane protein CASK OS=Rattus norvegicus GN=Cask PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.487e-27
Identity = 67/181 (37.02%), Postives = 104/181 (57.46%), Query Frame = 1
Query:   28 NIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR-----FSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLL-HTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFR 552
            ++KRE SI   L HPHIV+L E  ++   +Y V EF+ G +L  +I K       +SE ++  Y++Q++ A+ YCH   + HRD+KP  +LL    N      G   V  Q+   GL+     GTP ++APE++ ++ Y G  VD+W CGVILF+L +G LPF       +++ I KG+++
Sbjct:   58 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYK 236          

HSP 2 Score: 23.0978 bits (48), Expect = 1.487e-27
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKK 665
            +P  RITV + ++ PW K+
Sbjct:  260 DPAERITVYEALNHPWLKE 278          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.500e-27
Identity = 72/195 (36.92%), Postives = 110/195 (56.41%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLN-HPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLL---LDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 564
            K++      ++ REI IM  L+ H ++V++       + ++ VME  +GGELF +I  KG +SE  + + ++ +V  V  CHS GV HRDLKPEN L   +DE+  LK +DFGLS      +       + G+P YVAPE+L K    G + D+WS GVIL++L +G  PF   +   ++++I  G  +F    W
Sbjct:   69 KLLCKEDYEDVWREIQIMHHLSEHANVVRIEGTYEDSTAVHLVMELCEGGELFDRIVQKGHYSERQAARLIKTIVEVVEACHSLGVMHRDLKPENFLFDTIDEDAKLKATDFGLSVF---YKPGESFCDVVGSPYYVAPEVLRK--LYGPESDVWSAGVILYILLSGVPPFWAESEPGIFRQILLGKLDFHSEPW 258          

HSP 2 Score: 25.409 bits (54), Expect = 1.500e-27
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPW 656
            NP+TR+T  +++  PW
Sbjct:  276 NPKTRLTAHEVLRHPW 291          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: KCC2_YEAST (Calcium/calmodulin-dependent protein kinase II OS=Saccharomyces cerevisiae GN=CMK2 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.503e-27
Identity = 69/183 (37.70%), Postives = 108/183 (59.02%), Query Frame = 1
Query:   40 EISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKI----YKGEFRCPKW 564
            E+SI+++L+HP+IV   +   +K K Y V +   GGELF +I ++G+F+E  + + + Q++ AV Y HS+ V HRDLKPEN+L     EN  L ++DFG++  K     + L++   G+  YVAPE+L++ G+ G   D+WS GVI + L  GY PF   ++    ++     Y   F  P W
Sbjct:   96 ELSILQKLSHPNIVSFKDWFESKDKFYIVTQLATGGELFDRILSRGKFTEVDAVEIIVQILGAVEYMHSKNVVHRDLKPENVLYVDKSENSPLVIADFGIA--KQLKGEEDLIYKAAGSLGYVAPEVLTQDGH-GKPCDIWSIGVITYTLLCGYSPFIAESVEGFMEECTASRYPVTFHMPYW 275          

HSP 2 Score: 22.3274 bits (46), Expect = 1.503e-27
Identity = 7/16 (43.75%), Postives = 10/16 (62.50%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPW 656
            NP  R T  +++ DPW
Sbjct:  293 NPADRPTATELLDDPW 308          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: ULK2_MOUSE (Serine/threonine-protein kinase ULK2 OS=Mus musculus GN=Ulk2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27
Identity = 66/175 (37.71%), Postives = 103/175 (58.86%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLD---------ENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF--NDPNLMSMY 525
            +EI I++ L H +IV LY+V    + ++ VME+  GG+L   + AKG  SED  R +L Q+ +A+   HS+G+ HRDLKP+N+LL              +K++DFG +     + ++ +  TLCG+P Y+APE++  + YD AK DLWS G +++    G  PF  N P  + M+
Sbjct:   55 KEIKILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKGIIHRDLKPQNILLSYANRRKSNVSGIRIKIADFGFAR---YLHSNTMAATLCGSPMYMAPEVIMSQHYD-AKADLWSIGTVIYQCLVGKPPFQANSPQDLRMF 225          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PKD1_DICDI (Developmentally-regulated protein kinase 1 OS=Dictyostelium discoideum GN=pkaD PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27
Identity = 62/162 (38.27%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   28 NIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR-FSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHT--LCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFND 504
            ++  EI+IM  ++HP+IVK Y    T +KI+ +ME+    +LF  +   + F+E  ++  + ++V A+ Y H+  + +RDLKPEN+L+DE G++K++DFG S      +T G  +T  +CGT  Y+APEIL+     G  VD W+ GV+++ L  G LPF++
Sbjct:  378 HVNNEINIMLNISHPYIVKTYSTFNTPTKIHFIMEYAGKKDLFHHLRANKCFTEQTTKLIVAEIVLAIEYLHAENIIYRDLKPENILIDEKGHIKLTDFGFSK-----KTVGGKNTSSVCGTFDYMAPEILNSSNGHGKPVDWWALGVVVYELVTGKLPFSN 534          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: CHK1_USTMA (Serine/threonine-protein kinase CHK1 OS=Ustilago maydis GN=CHK1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.945e-27
Identity = 64/143 (44.76%), Postives = 89/143 (62.24%), Query Frame = 1
Query:  115 IYCVMEFVKGGELFAKIAKGR-FSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYK 540
            +Y V+E   GG+LF KIA      EDL+  Y QQL++ + Y HS+GV HRD+KPEN+LLD  GNLK++DFGL +V      +  L   CG+  Y+APE ++ K Y G  VD+WS GV+LF +  G  P+++P   S     Y+
Sbjct:  143 LYMVLELGAGGDLFDKIAPDYGVEEDLAHFYFQQLLAGLEYIHSQGVTHRDIKPENMLLDAEGNLKIADFGLCSVYKYKGKERELTGACGSLPYIAPE-MNGKPYRGEPVDVWSSGVVLFAMLVGSTPWDEPTSRSPEYSAYR 284          

HSP 2 Score: 22.3274 bits (46), Expect = 1.945e-27
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 3
Query:  612 PETRITVDQIIHDPWFKK 665
            PE RIT + I    WFK+
Sbjct:  313 PEKRITFEGIRRHRWFKR 330          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: ULK2_HUMAN (Serine/threonine-protein kinase ULK2 OS=Homo sapiens GN=ULK2 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27
Identity = 66/175 (37.71%), Postives = 103/175 (58.86%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLD---------ENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF--NDPNLMSMY 525
            +EI I++ L H +IV LY+V    + ++ VME+  GG+L   + AKG  SED  R +L Q+ +A+   HS+G+ HRDLKP+N+LL              +K++DFG +     + ++ +  TLCG+P Y+APE++  + YD AK DLWS G +++    G  PF  N P  + M+
Sbjct:   55 KEIKILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKGIIHRDLKPQNILLSYANRRKSSVSGIRIKIADFGFAR---YLHSNMMAATLCGSPMYMAPEVIMSQHYD-AKADLWSIGTVIYQCLVGKPPFQANSPQDLRMF 225          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: KCC1_YEAST (Calcium/calmodulin-dependent protein kinase I OS=Saccharomyces cerevisiae GN=CMK1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 1
Query:   40 EISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGE----FRCPKW 564
            E+ I++RL+HP+IV   +   +K K Y + +  KGGELF +I K G+F+E+ + + L +++SAV Y HS+ + HRDLKPENLL     +   L V+DFG++  K     + LL+   G+  YVAPE+L++ G+ G   D+WS GVI + L  GY  F    +     +   GE    F  P W
Sbjct:   86 ELDILQRLHHPNIVAFKDWFESKDKFYIITQLAKGGELFDRILKKGKFTEEDAVRILVEILSAVKYMHSQNIVHRDLKPENLLYIDKSDESPLVVADFGIA--KRLKSDEELLYKPAGSLGYVAPEVLTQDGH-GKPCDIWSIGVITYTLLCGYSAFRAERVQDFLDECTTGEYPVKFHRPYW 265          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: TSSK5_MOUSE (Testis-specific serine/threonine-protein kinase 5 OS=Mus musculus GN=Tssk5 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27
Identity = 71/179 (39.66%), Postives = 99/179 (55.31%), Query Frame = 1
Query:   31 IKREI-SIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR-------FSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG 543
            + REI S+     H +IV+LYE      + Y V+E    G+L   I             E+ +R+   QLVSAV +CH+ G+ HRDLK EN+LLD+ G +K++DFG +        + LL T CG+ AY APEIL  K Y+G + DLWS G+IL  + +G LPF +     M   I +G
Sbjct:   88 LPREILSLNATYKHMNIVQLYETYQNSQRSYLVLELAARGDLLEHINAVSDLRCCPGLEEEEARRLFWQLVSAVAHCHNVGIVHRDLKCENILLDDQGFIKLTDFGFANWVGL--KNSLLSTFCGSVAYTAPEILMSKKYNGEQADLWSLGIILHAMVSGKLPFKEHQPHRMLNLIRRG 264          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: KS6A4_HUMAN (Ribosomal protein S6 kinase alpha-4 OS=Homo sapiens GN=RPS6KA4 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27
Identity = 73/173 (42.20%), Postives = 111/173 (64.16%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRL-NHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR-FSEDLSRKYLQQLVSAVGYCHSR-GVFHRDLKPENLLLDEN---GNLKVSDFGLSAVKDQIRTDGL-LHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF 498
            KI+S  L +N +RE++ +R   +HP++V L+EV   +   Y V+E ++GGEL   I K R FSE  + + L+ LVSAV + H   GV HRDLKPEN+L  ++     +K+ DFG + ++ Q  + G+ + T C T  Y APE+L+++GYD    DLWS GVIL+++ +G +PF
Sbjct:  440 KILSRRLEANTQREVAALRLCQSHPNVVNLHEVHHDQLHTYLVLELLRGGELLEHIRKKRHFSESEASQILRSLVSAVSFMHEEAGVVHRDLKPENILYADDTPGAPVKIIDFGFARLRPQ--SPGVPMQTPCFTLQYAAPELLAQQGYD-ESCDLWSLGVILYMMLSGQVPF 609          

HSP 2 Score: 102.449 bits (254), Expect = 2.429e-21
Identity = 56/147 (38.10%), Postives = 88/147 (59.86%), Query Frame = 1
Query:   70 PHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGR-FSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLS---AVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF 498
            P +V L+    T +K++ ++++V GGE+F  + + + F E   R Y  ++V A+ + H  G+ +RDLK EN+LLD  G++ ++DFGLS     +++ RT     + CGT  Y+APEI+  K   G  VD WS G++LF L  G  PF
Sbjct:   96 PFLVTLHYAFQTDAKLHLILDYVSGGEMFTHLYQRQYFKEAEVRVYGGEIVLALEHLHKLGIIYRDLKLENVLLDSEGHIVLTDFGLSKEFLTEEKERT----FSFCGTIEYMAPEIIRSKTGHGKAVDWWSLGILLFELLTGASPF 238          
The following BLAST results are available for this feature:
BLAST of FC931797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSKP_RAT1.487e-2737.02Peripheral plasma membrane protein CASK OS=Rattus ... [more]
CDPK_SOYBN1.500e-2736.92Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
KCC2_YEAST1.503e-2737.70Calcium/calmodulin-dependent protein kinase II OS=... [more]
ULK2_MOUSE1.736e-2737.71Serine/threonine-protein kinase ULK2 OS=Mus muscul... [more]
PKD1_DICDI1.736e-2738.27Developmentally-regulated protein kinase 1 OS=Dict... [more]
CHK1_USTMA1.945e-2744.76Serine/threonine-protein kinase CHK1 OS=Ustilago m... [more]
ULK2_HUMAN2.268e-2737.71Serine/threonine-protein kinase ULK2 OS=Homo sapie... [more]
KCC1_YEAST2.268e-2738.80Calcium/calmodulin-dependent protein kinase I OS=S... [more]
TSSK5_MOUSE2.962e-2739.66Testis-specific serine/threonine-protein kinase 5 ... [more]
KS6A4_HUMAN2.962e-2742.20Ribosomal protein S6 kinase alpha-4 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionC34201C09EF PostHarveN Citrus clementina cDNA clone C34201C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931797 ID=FC931797; Name=FC931797; organism=Citrus clementina; type=EST; length=710bp
AAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGAGAAATCTCCAT
CATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTACGAGGTCTTAG
CCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCAAAGGCGGCGAG
CTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAA
GTACCTCCAGCAACTCGTATCCGCCGTCGGATATTGCCACTCGCGCGGAG
TCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGGACGAGAACGGG
AATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAGGATCAGATTCG
TACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGCTTACGTGGCAC
CGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGGTCGACTTGTGG
TCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTACCTGCCGTTTAA
CGATCCGAATTTGATGAGCATGTATAAGAAGATATATAAAGGTGAATTTC
GGTGCCCTAAATGGATGTCTAGCGATCTGAGACGGCTTTTGTCGCGACTT
CTTGATACAATCCAGAGACGAGGATCACCGTTGATCAGATTATTCATGAT
CCGTGGTTCAAAAAGGGCGGACTGAAAGAATTGAGATTCTACGATTCTGA
TTATTACGAT
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