FC931797

Overview
NameFC931797
Unique NameFC931797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8095 contig Ccv1_Contig8095:385..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PLK4_AEDAE (Serine/threonine-protein kinase PLK4 OS=Aedes aegypti GN=SAK PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.288e-27
Identity = 63/190 (33.16%), Postives = 103/190 (54.21%), Query Frame = 1
Query:    4 IMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGEL--FAKIAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            + SS + + +++E+SI  +L HP I++LY      S +Y V+E  + GEL  + +  K  F+E  +   L+Q+V  + Y HS  + HRD+   NLLL +   +K+SDFGL+      R D    TLCGTP Y++PE+ S+  + G   D+W  G +L+    G  PF+   + S   K+    +  P ++
Sbjct:   46 MQSSGMANRVRQEVSIHSQLKHPSILELYTFFEDASHVYLVLELAENGELQRYLRETKKTFNEYEAASVLKQVVDGLLYLHSHHILHRDMSLANLLLTKQMTVKISDFGLAT--QLTRPDEKHMTLCGTPNYISPEVASRASH-GLPADVWGLGCMLYTFLVGKPPFDTEGVKSTLTKVVMSNYTIPPYI 232          

HSP 2 Score: 23.8682 bits (50), Expect = 3.288e-27
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKK 665
            NP  RI +DQ++  P+ +K
Sbjct:  247 NPAERIKLDQVLQHPFMRK 265          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: WIS4_SCHPO (MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe GN=wis4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 66/172 (38.37%), Postives = 103/172 (59.88%), Query Frame = 1
Query:   22 VSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAKGRFS-EDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLS-----AVKDQIRTDGL---LHTLCGTPAYVAPEIL--SKKGYDGAKVDLWSCGVILFVLTAGYLPFND 504
            V  I  E++++ RLNHP++V  Y V   + K+Y  MEF +GG L   +A GR   E++ + Y+ QL+  + Y HS+ + HRD+KP N+LLD  G +K SDFG +         ++R + +   L  L GTP Y+APEI+  +KKG  GA +D+WS G ++  +  G  P+++
Sbjct: 1080 VDQIHNEMTVLERLNHPNVVTYYGVEVHREKVYIFMEFCQGGSLADLLAHGRIEDENVLKVYVVQLLEGLAYIHSQHILHRDIKPANILLDHRGMIKYSDFGSALYVSPPTDPEVRYEDIQPELQHLAGTPMYMAPEIILGTKKGDFGA-MDIWSLGCVILEMMTGSTPWSE 1250          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SMKTR_MOUSE (Sperm motility kinase Tcr mutant form OS=Mus musculus GN=Smoktcr PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 56/169 (33.14%), Postives = 100/169 (59.17%), Query Frame = 1
Query:   31 IKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKI 534
            +  E  ++   +HP+I+ L +V+ TK K+Y +ME  +G  L+  I   G   ED +R   +QL+SA+ YCH++G+ HRDL P+N++++++G +K+ DFGL   +   +   L    C    +  PE+L  + YD  K+D+W  GV+L+ +  G + F+  ++  + K+I
Sbjct:   49 VMSEAELLMMTDHPNIISLLQVIETKKKVYLIMELCEGKSLYQHIQNAGYLQEDEARPLFKQLLSAMNYCHNQGIVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPGQNHNL---FCEIYPFSTPEVLFNRPYDMRKIDVWGLGVVLYFMVTGKILFDTASVEKLRKQI 214          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PLK4_HUMAN (Serine/threonine-protein kinase PLK4 OS=Homo sapiens GN=PLK4 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 62/188 (32.98%), Postives = 107/188 (56.91%), Query Frame = 1
Query:   13 SNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGEL--FAKIAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLH-TLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            + +V  ++ E+ I  +L HP I++LY      + +Y V+E    GE+  + K     FSE+ +R ++ Q+++ + Y HS G+ HRDL   NLLL  N N+K++DFGL+    Q++     H TLCGTP Y++PEI ++  + G + D+WS G + + L  G  PF+   + +   K+   ++  P ++
Sbjct:   51 AGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAT---QLKMPHEKHYTLCGTPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 234          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PDPKB_DICDI (3-phosphoinositide-dependent protein kinase B OS=Dictyostelium discoideum GN=pdkB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 73/196 (37.24%), Postives = 113/196 (57.65%), Query Frame = 1
Query:    1 KIMSSNLVSNIKR------EISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQI---RTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCP 558
            KI++  L+   K+      E +I+  L++P+IVKL+     ++ +Y ++E+   G+L   + K G FS D+ R Y  +++ A+ Y H +G+ HRDLKPEN+LL +N +LK+SDFG SA +  I          + CGT  YV PE+L++K   G + D+WS G +L+ L +G LPF   N    +  I K EF  P
Sbjct:  300 KILNKKLIIKEKKAKYVNTEKTILDSLDNPNIVKLFYTFQDENNLYFILEYCPNGDLLGALKKAGCFSIDVVRFYAAEILIALEYLHGKGIAHRDLKPENILLGKNQHLKLSDFG-SAKQLSIGSHHKGSRSGSFCGTAEYVCPELLTEKS-AGVEADIWSYGCLLYQLVSGKLPFKGFNEYQTFLLITKREFSYP 493          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 73/171 (42.69%), Postives = 104/171 (60.82%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLN-HPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPF 498
            K++S     +I+REI IM+ L+  P+IV+       KS ++ VME   GGELF +I AKG ++E  +    + +V+ V  CH  GV HRDLKPEN LL   +EN  LK +DFGLS     I    +   + G+  YVAPE+L ++ Y G ++D+WS GVIL++L +G  PF
Sbjct:  100 KLVSKADREDIRREIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYTERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLATMEENAMLKATDFGLSVF---IEEGKMYRDIVGSAYYVAPEVL-RRSY-GKEIDVWSAGVILYILLSGVPPF 265          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PLK4_PONAB (Serine/threonine-protein kinase PLK4 OS=Pongo abelii GN=PLK4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27
Identity = 62/188 (32.98%), Postives = 107/188 (56.91%), Query Frame = 1
Query:   13 SNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGEL--FAKIAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLH-TLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            + +V  ++ E+ I  +L HP I++LY      + +Y V+E    GE+  + K     FSE+ +R ++ Q+++ + Y HS G+ HRDL   NLLL  N N+K++DFGL+    Q++     H TLCGTP Y++PEI ++  + G + D+WS G + + L  G  PF+   + +   K+   ++  P ++
Sbjct:   51 AGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAT---QLKMPHEKHYTLCGTPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPTFL 234          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PLK4_DANRE (Serine/threonine-protein kinase PLK4 OS=Danio rerio GN=plk4 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27
Identity = 60/185 (32.43%), Postives = 104/185 (56.22%), Query Frame = 1
Query:   13 SNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGEL--FAKIAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLH-TLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCP 558
            + +V  +  E+ I  RL HP +++LY      + +Y V+E    GE+  + K  K  F+E+ +R ++ Q+V  + Y H+ G+ HRDL   NLLL  + N+K++DFGL+    Q++     H T+CGTP Y++PE+ ++  + G + D+WS G + +    G  PF+   +     K+  GE++ P
Sbjct:   51 AGMVQRVINEVEIQCRLKHPSVLELYNYFEDSNYVYLVLEMCHNGEMSRYLKERKNPFTEEEARHFMHQIVKGMLYLHTHGIMHRDLTLTNLLLTTSMNIKIADFGLAT---QLKLPSEKHFTMCGTPNYISPEVATRSAH-GLESDVWSLGCMFYAFLTGRPPFDTDTVKRTLNKVVLGEYQMP 231          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.291e-27
Identity = 72/195 (36.92%), Postives = 109/195 (55.90%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLN-HPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 564
            K+++     +++REI IM+ L+  P+IV+       +  +  VME   GGELF +I AKG ++E  +    +Q+V+ V  CH  GV HRDLKPEN LL   DE   +K +DFGLS     I    +   + G+  YVAPE+L ++   G +VD+WS G+IL++L +G  PF       ++  I +G  +F    W
Sbjct:  126 KLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRIIAKGHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSKDEKALIKATDFGLSVF---IEEGKVYRDIVGSAYYVAPEVLRRR--YGKEVDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGHIDFESQPW 315          

HSP 2 Score: 25.0238 bits (53), Expect = 7.291e-27
Identity = 7/21 (33.33%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKGG 671
            +P+ RI+   ++  PW ++GG
Sbjct:  333 DPKRRISAADVLQHPWLREGG 353          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.304e-27
Identity = 72/195 (36.92%), Postives = 109/195 (55.90%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRL-NHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLL---DENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKG--EFRCPKW 564
            K++S   V +++REI IM  L  + +IV +         ++ VME   GGELF +I  +G +SE  + + ++ +V  V  CHS GV HRDLKPEN LL   D++ +LK  DFGLS      +   +   + G+P YVAPE+L K  + G + D+W+ GVIL++L +G  PF       ++  + KG  +F    W
Sbjct:   59 KLISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELIKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVF---FKPGQIFEDVVGSPYYVAPEVLLK--HYGPEADVWTAGVILYILVSGVPPFWAETQQGIFDAVLKGHIDFDSDPW 248          

HSP 2 Score: 24.2534 bits (51), Expect = 7.304e-27
Identity = 9/28 (32.14%), Postives = 14/28 (50.00%), Query Frame = 3
Query:  612 PETRITVDQIIHDPWFKKGGLKELRFYD 695
            P  R+T  Q++  PW  + G+   R  D
Sbjct:  267 PSERLTAHQVLRHPWICENGVAPDRALD 294          
The following BLAST results are available for this feature:
BLAST of FC931797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PLK4_AEDAE3.288e-2733.16Serine/threonine-protein kinase PLK4 OS=Aedes aegy... [more]
WIS4_SCHPO3.868e-2738.37MAP kinase kinase kinase wis4 OS=Schizosaccharomyc... [more]
SMKTR_MOUSE3.868e-2733.14Sperm motility kinase Tcr mutant form OS=Mus muscu... [more]
PLK4_HUMAN3.868e-2732.98Serine/threonine-protein kinase PLK4 OS=Homo sapie... [more]
PDPKB_DICDI3.868e-2737.243-phosphoinositide-dependent protein kinase B OS=D... [more]
CDPK2_MAIZE3.868e-2742.69Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
PLK4_PONAB5.052e-2732.98Serine/threonine-protein kinase PLK4 OS=Pongo abel... [more]
PLK4_DANRE5.052e-2732.43Serine/threonine-protein kinase PLK4 OS=Danio reri... [more]
CDPK9_ARATH7.291e-2736.92Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDPKQ_ARATH7.304e-2736.92Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34201C09EF PostHarveN Citrus clementina cDNA clone C34201C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931797 ID=FC931797; Name=FC931797; organism=Citrus clementina; type=EST; length=710bp
AAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGAGAAATCTCCAT
CATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTACGAGGTCTTAG
CCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCAAAGGCGGCGAG
CTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAA
GTACCTCCAGCAACTCGTATCCGCCGTCGGATATTGCCACTCGCGCGGAG
TCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGGACGAGAACGGG
AATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAGGATCAGATTCG
TACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGCTTACGTGGCAC
CGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGGTCGACTTGTGG
TCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTACCTGCCGTTTAA
CGATCCGAATTTGATGAGCATGTATAAGAAGATATATAAAGGTGAATTTC
GGTGCCCTAAATGGATGTCTAGCGATCTGAGACGGCTTTTGTCGCGACTT
CTTGATACAATCCAGAGACGAGGATCACCGTTGATCAGATTATTCATGAT
CCGTGGTTCAAAAAGGGCGGACTGAAAGAATTGAGATTCTACGATTCTGA
TTATTACGAT
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