FC931797

Overview
NameFC931797
Unique NameFC931797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK1_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragments) OS=Sus scrofa GN=PRKAA1 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.666e-44
Identity = 90/180 (50.00%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   34 KREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+  QQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   23 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 198          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.380e-44
Identity = 84/178 (47.19%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            RE+ IM+ LNHP+IVKL+EV+ T+  +Y +ME+  GGE+F   +A GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  102 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKITDFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 276          

HSP 2 Score: 23.483 bits (49), Expect = 3.380e-44
Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKGGLKE 680
            NP  R T++QI+ D W   G  +E
Sbjct:  291 NPVKRGTLEQIMKDRWINAGHEEE 314          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.482e-44
Identity = 88/190 (46.32%), Postives = 128/190 (67.37%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ SSNL   I RE+ +M+ LNHPHI+KLY+V+ TK  +Y V EF K GE+F  + + G  SE+ +RK   Q++SAV YCH   + HRDLK ENLLLD N ++K++DFG     +  ++   L T CG+P Y APE+   K Y+G ++D+WS GV+L+VL  G LPF+ PNL ++ +++ +G FR P +M
Sbjct:   62 RLDSSNL-EKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLADFGFG---NFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFM 247          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PAR1_CAEEL (Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.388e-44
Identity = 84/188 (44.68%), Postives = 128/188 (68.09%), Query Frame = 1
Query:    7 MSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ + +  + RE+ IM++L+HP+IVKLY+V+ T+  +Y V+E+  GGE+F   +A GR  E  +R   +Q+VSAV Y HS+ + HRDLK ENLLLD++ N+K++DFG S   +       L T CG+P Y APE+ S K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  206 LNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFS---NTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 390          

HSP 2 Score: 23.0978 bits (48), Expect = 4.388e-44
Identity = 8/20 (40.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG 668
            NP+ R ++D I+ D W   G
Sbjct:  405 NPQRRSSLDNIMKDRWMNVG 424          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: PAR1_CAEBR (Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 4.392e-44
Identity = 84/188 (44.68%), Postives = 128/188 (68.09%), Query Frame = 1
Query:    7 MSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ + +  + RE+ IM++L+HP+IVKLY+V+ T+  +Y V+E+  GGE+F   +A GR  E  +R   +Q+VSAV Y HS+ + HRDLK ENLLLD++ N+K++DFG S   +       L T CG+P Y APE+ S K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  164 LNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFS---NTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 348          

HSP 2 Score: 23.0978 bits (48), Expect = 4.392e-44
Identity = 8/20 (40.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG 668
            NP+ R ++D I+ D W   G
Sbjct:  363 NPQRRSSLDNIMKDRWMNVG 382          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 4.407e-44
Identity = 84/178 (47.19%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            RE+ IM+ LNHP+IVKL+EV+ T+  +Y +ME+  GGE+F   +A GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  102 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 276          

HSP 2 Score: 23.0978 bits (48), Expect = 4.407e-44
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG 668
            NP  R T++QI+ D W   G
Sbjct:  291 NPVKRGTLEQIMKDRWINAG 310          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.407e-44
Identity = 83/188 (44.15%), Postives = 124/188 (65.96%), Query Frame = 1
Query:    7 MSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ + +  + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+   GE+F   ++ GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD   N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:   95 LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFS---NEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYM 279          

HSP 2 Score: 24.2534 bits (51), Expect = 4.407e-44
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG 668
            NP  R T++QI+ D W   G
Sbjct:  294 NPAKRCTLEQIMKDKWINIG 313          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.407e-44
Identity = 83/188 (44.15%), Postives = 124/188 (65.96%), Query Frame = 1
Query:    7 MSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ + +  + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+   GE+F   ++ GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD   N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:   95 LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFS---NEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYM 279          

HSP 2 Score: 24.2534 bits (51), Expect = 4.407e-44
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG 668
            NP  R T++QI+ D W   G
Sbjct:  294 NPAKRCTLEQIMKDKWINIG 313          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.940e-44
Identity = 86/183 (46.99%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   22 VSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  I RE+ IM+ L HPHI++LY+V+ T+  IY V E+  GGE+F   +A GR +E  +R+  +Q+V+AV +CH R + HRDLK ENLLLD N N+K++DFG S +  + +   LL T CG+P Y APE+   K YDG KVD+WS GV+L+VL  G LPF+   L ++  ++  G+FR P +M
Sbjct:  100 LKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVYFCHCRSIVHRDLKAENLLLDHNLNIKIADFGFSNLFSRGQ---LLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFM 279          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 88/184 (47.83%), Postives = 123/184 (66.85%), Query Frame = 1
Query:   22 VSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  I RE+ IM+ L HPHI++LY+V+ T+  IY V E+  GGE+F   +A GR +E  +R+  +Q+V+AV +CH R + HRDLK ENLLLD N N+K++DFG S     + T G LL T CG+P Y APE+   K YDG KVD+WS GV+L+VL  G LPF+   L ++  ++  G+FR P +M
Sbjct:   49 LKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFS----NLFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFM 228          
The following BLAST results are available for this feature:
BLAST of FC931797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK1_PIG2.666e-4450.005'-AMP-activated protein kinase catalytic subunit ... [more]
MARK3_RAT3.380e-4447.19MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
SIK1_HUMAN3.482e-4446.32Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
PAR1_CAEEL4.388e-4444.68Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
PAR1_CAEBR4.392e-4444.68Serine/threonine-protein kinase par-1 OS=Caenorhab... [more]
MARK3_MOUSE4.407e-4447.19MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK4_MOUSE4.407e-4444.15MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN4.407e-4444.15MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
SIK3_DANRE5.940e-4446.99Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]
SIK3_MOUSE7.758e-4447.83Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC34201C09EF PostHarveN Citrus clementina cDNA clone C34201C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931797 ID=FC931797; Name=FC931797; organism=Citrus clementina; type=EST; length=710bp
AAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGAGAAATCTCCAT
CATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTACGAGGTCTTAG
CCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCAAAGGCGGCGAG
CTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAA
GTACCTCCAGCAACTCGTATCCGCCGTCGGATATTGCCACTCGCGCGGAG
TCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGGACGAGAACGGG
AATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAGGATCAGATTCG
TACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGCTTACGTGGCAC
CGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGGTCGACTTGTGG
TCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTACCTGCCGTTTAA
CGATCCGAATTTGATGAGCATGTATAAGAAGATATATAAAGGTGAATTTC
GGTGCCCTAAATGGATGTCTAGCGATCTGAGACGGCTTTTGTCGCGACTT
CTTGATACAATCCAGAGACGAGGATCACCGTTGATCAGATTATTCATGAT
CCGTGGTTCAAAAAGGGCGGACTGAAAGAATTGAGATTCTACGATTCTGA
TTATTACGAT
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