FC931803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RACB_DICDI (Rho-related protein racB OS=Dictyostelium discoideum GN=racB PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.541e-56 Identity = 109/173 (63.01%), Postives = 132/173 (76.30%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLAD--HHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 IK V VGDGAVGKTC+LISYTSN+FPT+YVPTVFDN+SANV+VD TV+LGLWDTAGQEDY+RLRPLSY DVFL+ F++IS+ SY NV KW PE+ H+ P +ILVGTK DLR+DK+ L P+T QGE++ K I A Y+ECS+ TQ+ +K VFD AIK V Sbjct: 4 IKLVVVGDGAVGKTCLLISYTSNSFPTEYVPTVFDNYSANVMVDNKTVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFAIISQTSYTNVKSKWWPEVTHHCPNCTIILVGTKCDLREDKESLEKLREKHQQPLTFQQGEQMAKEIKAFCYMECSALTQKGLKQVFDEAIKAV 176
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAC1C_DICDI (Rho-related protein rac1C OS=Dictyostelium discoideum GN=rac1C PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.541e-56 Identity = 108/173 (62.43%), Postives = 133/173 (76.88%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDK--QFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VDG +NLGLWDTAGQEDY+RLRPLSY DVFL+ FS+IS +SYENV+ KW PE+ H+AP VP+ILVGTK+D+R+DK Q P++ QG K I A Y+ECS+ TQ+ +K VFD AI+ V Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSYENVSGKWGPEVFHHAPNVPIILVGTKMDMREDKETQDRLKEKKLYPVSYEQGLLKMKEINAFKYLECSALTQKGLKTVFDEAIRSV 176
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RECG_ENTHI (Rho-related protein racG OS=Entamoeba histolytica GN=RACG PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.986e-56 Identity = 105/175 (60.00%), Postives = 133/175 (76.00%), Query Frame = 1 Query: 136 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 R +K V VGDGAVGKTCMLISYT+N FP +Y+PTVF+N+++++VVD +NLGLWDTAGQEDY+RLRPLSY DVFL+ FS+I+ ASYENV KW PE+ + P VP+ILVGTK+D+RDD + + VPI QG+EL K IGA YIECS+ TQ N+K VF+ A++ V Sbjct: 2 RPVKLVIVGDGAVGKTCMLISYTTNAFPNEYIPTVFENYNSSLVVDDVKINLGLWDTAGQEDYDRLRPLSYPSTDVFLVCFSVIAPASYENVEGKWKPEIDQHCPNVPIILVGTKIDIRDDPEQVKRLAEKNIVPIQPPQGDELAKKIGAVKYIECSALTQANLKLVFEEAVRAV 176
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.454e-55 Identity = 104/179 (58.10%), Postives = 128/179 (71.51%), Query Frame = 1 Query: 124 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 MSA+ IK V +GDGAVGKTC+LISY +N FP DY+PTVFDN+ N+ + LGLWDTAGQE+Y++LRPLSY A+VFL+ FS+ + S+ENV KW PE+ H+ P VP ILVGTKLD RDD+ L G PITT QG +L + I A Y+ECS+KT QN+K VFD AIK V Sbjct: 1 MSAAEVIKLVVIGDGAVGKTCLLISYANNRFPEDYIPTVFDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLKQVFDEAIKSV 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAC1_CAEEL (Ras-related protein ced-10 OS=Caenorhabditis elegans GN=ced-10 PE=1 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 8.454e-55 Identity = 103/173 (59.54%), Postives = 129/173 (74.57%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VDG +NLGLWDTAGQEDY+RLRPLSY DVFL+ F+L + AS+ENV KW PE+ H+ P P+ILVGTK DLR+D+ + P++ QG + K I A Y+ECS+ TQ+ +K VFD AI+ V Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAV 176
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: CDC42_SCHPO (Cell division control protein 42 homolog OS=Schizosaccharomyces pombe GN=cdc42 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 7.157e-54 Identity = 103/171 (60.23%), Postives = 130/171 (76.02%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDD---KQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 IKCV VGDGAVGKTC+LISYT+N FP+DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVFL+ FS+ S AS+ENV +KW PE+ H+ PGVP ++VGT++DLRDD +Q LA H P+T QGE L + +GA Y+ECS+ TQ+ +K VFD AI Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQH-QHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAI 173
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: CDC42_CANAL (Cell division control protein 42 homolog OS=Candida albicans GN=CDC42 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.082e-53 Identity = 102/170 (60.00%), Postives = 127/170 (74.71%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLADHH--GAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 IKCV VGDGAVGKTC+LISYT++ FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVFL+ FS+IS AS+ENV +KW PE+ H+ PGVP+I+VGT+ DLR+D L H PIT QGE+L K + A Y+ECS+ TQ+ +K VFD AI Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTSKFPADYVPTVFDNYAVTVMIGDEPFTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPASFENVKEKWFPEVHHHCPGVPIIIVGTQTDLRNDDVILQRLHRQKLSPITQEQGEKLAKELRAVKYVECSALTQRGLKTVFDEAI 173
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: CDC42_YEAST (Cell division control protein 42 OS=Saccharomyces cerevisiae GN=CDC42 PE=1 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 1.763e-52 Identity = 98/170 (57.65%), Postives = 125/170 (73.53%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 +KCV VGDGAVGKTC+LISYT+N FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVFL+ FS+IS S+ENV +KW PE+ H+ PGVP ++VGT++DLRDDK + PIT+ QG L + + A Y+ECS+ TQ+ +K VFD AI Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFDEAI 173
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOQ_HUMAN (Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 8.748e-52 Identity = 96/170 (56.47%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLA--DHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVFL+ FS+++ AS++NV ++W+PEL+ YAP VP +L+GT++DLRDD + LA + PI QG++L K IGA Y+ECS+ TQ+ +K VFD AI Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOQ_RAT (Rho-related GTP-binding protein RhoQ OS=Rattus norvegicus GN=Rhoq PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.143e-51 Identity = 95/170 (55.88%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLA--DHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVFL+ FS+++ AS++NV ++W+PEL+ YAP VP +L+GT++DLRDD + LA + P+ QG++L K IGA Y+ECS+ TQ+ +K VFD AI Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 179 The following BLAST results are available for this feature:
BLAST of FC931803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931803 ID=FC931803; Name=FC931803; organism=Citrus clementina; type=EST; length=654bpback to top |