FC931803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOU_MOUSE (Rho-related GTP-binding protein RhoU OS=Mus musculus GN=Rhou PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.465e-46 Identity = 90/172 (52.33%), Postives = 123/172 (71.51%), Query Frame = 1 Query: 136 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 R +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y D+FLL FS++S S++NV +KW+PE+R + P P+ILVGT+ DLR+D + L D P+ + + + A YIECS+ TQ+N+K VFDAAI Sbjct: 51 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSALTQKNLKEVFDAAI 222
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.205e-46 Identity = 90/170 (52.94%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG V L L DTAGQ+++++LRPL Y AD+FLL FS++ +S++NV++KW+PE+R + P P+ILVGT+ DLR+D + L D P+ + I A YIECS+ TQ+N+K VFDAAI Sbjct: 47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAAI 216
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RACH_DICDI (Rho-related protein racH OS=Dictyostelium discoideum GN=racH PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.173e-46 Identity = 94/172 (54.65%), Postives = 121/172 (70.35%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGV-PMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 IK + VGD +VGKTC+LISYT+N+FP +YVPTVFDN++AN +V+ + +NLGLWDTAG E+YN RPLSY G DVF++ FSLIS+ S+ENV KKW PE+ V P+ILVGTKLDLR + +T GE++R IGA Y ECS+ TQ + VF+ A +VV Sbjct: 5 IKVMVVGDMSVGKTCLLISYTTNSFPGEYVPTVFDNYNANAIVNNTPINLGLWDTAGSEEYNSFRPLSYPGTDVFIICFSLISQTSFENVIKKWHPEIIQNMEQVPPIILVGTKLDLRGKGK-----SEEKEVTPEMGEQMRAAIGAYKYSECSALTQDGLTTVFEEAGRVV 171
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOA_EMENI (GTP-binding protein rhoA OS=Emericella nidulans GN=rhoA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.368e-46 Identity = 91/170 (53.53%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLADHH--GAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V VGDGA GKTC+LI ++ TFP YVPTVF+N+ A+V VDG V L LWDTAGQEDY+RLRPLSY + V L+ F++ S S +NV +KWI E+ H+ G+P+ILVG K DLR D + + + + P+T QGEE+RK IGA Y+ECS++T + V+ VF+AA + Sbjct: 7 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPKTIEELNKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATR 176
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.726e-45 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL--ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V VGDGA GKTC+LI ++ TFP YVPTVF+N+ A+V VDG V L LWDTAGQEDY+RLRPLSY ++V L+ FS+ S S +NV +KWI E+ H+ GVP+ILVG K DLRDD + P++T++G+++ + IGA Y+ECS+KT + V+ VF+AA + Sbjct: 11 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVGCKSDLRDDPHTIEALRQQQQQPVSTSEGQQVAQRIGAADYLECSAKTGRGVREVFEAATR 180
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHO1_CAEEL (Ras-like GTP-binding protein rhoA OS=Caenorhabditis elegans GN=rho-1 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.649e-45 Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLAD--HHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAA 642 K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY+RLRPLSY DV L+ FS+ S S EN+ +KW PE+RH+ P VP+ILVG K DLR D Q + + P+ QG + + IGA Y+ECS+KT+ ++ VF+ A Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKA 174
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHO1_KLULA (GTP-binding protein Rho1 OS=Kluyveromyces lactis GN=RHO1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.931e-45 Identity = 92/170 (54.12%), Postives = 117/170 (68.82%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLAD--HHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V VGDGA GKTC+LI + FP YVPTVFDN+ A+V VDG V L LWDTAGQEDY+RLRPLSY ++V L+ +S+ S ENV +KWI E+ H+ GVP+ILVG K DLR+D Q + + G P++ AQ +E+ IGA YIECS+KT V+ VF+AA + Sbjct: 14 KLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLHFCQGVPIILVGCKADLRNDPQVVEELRAQGLQPVSQAQAQEVADQIGAVDYIECSAKTGYGVREVFEAATR 183
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 179.104 bits (453), Expect = 1.767e-44 Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLAD--HHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V VGDGA GKTC+LI ++ FP YVPTVF+N+ A+V VDG V L LWDTAGQEDY+RLRPLSY ++V L+ FS+ S ENV +KWI E+ H+ GVP+ILVG K+DLR+D Q + G P+T+ +G+ + IGA Y ECS+KT V+ VF+AA + Sbjct: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR 181
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOV_RAT (Rho-related GTP-binding protein RhoV OS=Rattus norvegicus GN=Rhov PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44 Identity = 89/173 (51.45%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL-----ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 IKCV VGDGAVGK+ +++SYT N +P+ Y PT D FS V+VDG+ V + LWDTAGQED++RLR L Y DVFL FS++ +S++N+ +KW+PE+R + P P++LVGT+ DLRDD L G VP AQG L + I A Y+ECS+ TQ+N+K VFD+AI Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPSRYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPEPQAQG--LAEKIRACCYLECSALTQKNLKEVFDSAI 202
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RHOV_MOUSE (Rho-related GTP-binding protein RhoV OS=Mus musculus GN=Rhov PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFL-----ADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 IKCV VGDGAVGK+ +++SYT N +P Y PT D FS V+VDG+ V + LWDTAGQED++RLR L Y DVFL FS++ +S++N+ +KW+PE+R + P P++LVGT+ DLRDD L G VP AQG L + I A Y+ECS+ TQ+N+K VFD+AI Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSALTQKNLKEVFDSAI 202 The following BLAST results are available for this feature:
BLAST of FC931803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931803 ID=FC931803; Name=FC931803; organism=Citrus clementina; type=EST; length=654bpback to top |