FC931804 | Citrus Genome Database

Overview


Name	FC931804
Unique Name	FC931804
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	708

Libraries


Library Name	Type
PostHarveN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.175e-59
Identity = 111/196 (56.63%), Postives = 140/196 (71.43%), Query Frame = 1

Query:   85 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAK 198

HSP 2 Score: 28.1054 bits (61), Expect = 2.175e-59
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFD+AIAELD+LN
Sbjct:  199 TAFDDAIAELDTLN 212

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.175e-59
Identity = 112/194 (57.73%), Postives = 140/194 (72.16%), Query Frame = 1

Query:   85 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            ++   V  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  G E+  +  +EYR+++E EL  ICND+LS++++ LIP+ +  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    2 DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE--GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNRSQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 193

HSP 2 Score: 27.335 bits (59), Expect = 2.175e-59
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFDEAIAELD+L+
Sbjct:  194 TAFDEAIAELDTLS 207

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.836e-59
Identity = 111/196 (56.63%), Postives = 140/196 (71.43%), Query Frame = 1

Query:   85 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D +LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQIESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAK 198

HSP 2 Score: 28.1054 bits (61), Expect = 2.836e-59
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFD+AIAELD+LN
Sbjct:  199 TAFDDAIAELDTLN 212

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.836e-59
Identity = 111/197 (56.35%), Postives = 143/197 (72.59%), Query Frame = 1

Query:   76 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 195

HSP 2 Score: 29.261 bits (64), Expect = 2.836e-59
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFDEAIAELD+LN
Sbjct:  196 TAFDEAIAELDTLN 209

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 2.836e-59
Identity = 111/197 (56.35%), Postives = 143/197 (72.59%), Query Frame = 1

Query:   76 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 195

HSP 2 Score: 29.261 bits (64), Expect = 2.836e-59
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFDEAIAELD+LN
Sbjct:  196 TAFDEAIAELDTLN 209

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 2.836e-59
Identity = 111/197 (56.35%), Postives = 143/197 (72.59%), Query Frame = 1

Query:   76 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 195

HSP 2 Score: 29.261 bits (64), Expect = 2.836e-59
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFDEAIAELD+LN
Sbjct:  196 TAFDEAIAELDTLN 209

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 2.836e-59
Identity = 111/197 (56.35%), Postives = 143/197 (72.59%), Query Frame = 1

Query:   76 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            M  ++   V  A+LAEQAERYD+M  AMK V +   EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E   NE+  +  KEYR+++E EL  ICND+L ++D++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    1 MTMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDVLQLLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 195

HSP 2 Score: 29.261 bits (64), Expect = 2.836e-59
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFDEAIAELD+LN
Sbjct:  196 TAFDEAIAELDTLN 209

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.698e-59
Identity = 110/194 (56.70%), Postives = 141/194 (72.68%), Query Frame = 1

Query:   85 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            ++   V  A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D  L+P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK 193

HSP 2 Score: 27.7202 bits (60), Expect = 3.698e-59
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            +AFDEAIAELD+LN
Sbjct:  194 SAFDEAIAELDTLN 207

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.821e-59
Identity = 109/194 (56.19%), Postives = 142/194 (73.20%), Query Frame = 1

Query:   85 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            ++   V  A+L+EQAERYD+M  +MK V +L  EL+ EERNL+SV YKNV+GARR+SWR++SSIEQK E  GN++  +  +EYR++VE EL  IC D+L ++D  L+P++T  ES VFY KMKGDYYRYL+E    D ++E   +S +          SE+ PTHPIRLGLALNFSVFYYEILNSP++AC LAK
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVANSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPDKACSLAK 193

HSP 2 Score: 27.7202 bits (60), Expect = 4.821e-59
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            +AFDEAIAELD+LN
Sbjct:  194 SAFDEAIAELDTLN 207

[Close]

BLAST of FC931804 vs. ExPASy Swiss-Prot
Match: 143GA_XENLA (14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-A PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.285e-59
Identity = 111/196 (56.63%), Postives = 139/196 (70.92%), Query Frame = 1

Query:   85 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIP--SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAK 666
            +RE  V  ARLAEQAERYD+M  AMK V +L+  L+ EERNL+SV YKNV+GARR+SWR++SSIEQK  A GNE+ ++ ++ YR+++E EL  +C D+LS++D  LI   S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKAVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELETVCQDVLSLLDNFLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAK 198

HSP 2 Score: 28.1054 bits (61), Expect = 6.285e-59
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3

Query:  666 TAFDEAIAELDSLN 707
            TAFD+AIAELD+LN
Sbjct:  199 TAFDDAIAELDTLN 212

The following BLAST results are available for this feature:

BLAST of FC931804 vs. ExPASy Swiss-Prot

BLAST of FC931804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142


Match Name	E-value	Identity	Description
1433G_HUMAN	2.175e-59	56.63	14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1...	[more]
1433Z_SHEEP	2.175e-59	57.73	14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P...	[more]
1433G_BOVIN	2.836e-59	56.63	14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S...	[more]
1433B_PONAB	2.836e-59	56.35	14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB...	[more]
1433B_MACFA	2.836e-59	56.35	14-3-3 protein beta/alpha OS=Macaca fascicularis G...	[more]
1433B_HUMAN	2.836e-59	56.35	14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB...	[more]
1433B_BOVIN	2.836e-59	56.35	14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P...	[more]
143BA_XENLA	3.698e-59	56.70	14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y...	[more]
143BB_XENLA	4.821e-59	56.19	14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y...	[more]
143GA_XENLA	6.285e-59	56.63	14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-...	[more]

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Properties


Property Name	Value
Genbank description	C34201D04EF PostHarveN Citrus clementina cDNA clone C34201D04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC931804 ID=FC931804; Name=FC931804; organism=Citrus clementina; type=EST; length=708bp
GAACAAGCTCAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAGAGCTAGCGA
GAGAAAGAGTGAGTGACTGAACGAAATGGAGAAGGAGAGAGAGCATCATG
TTTACTTGGCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTT
GAAGCCATGAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGA
GAGGAATCTGGTGTCTGTTGGGTACAAGAATGTGATTGGGGCAAGAAGAG
CATCATGGAGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGT
AATGAACAAAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGA
TGAGCTTGCAAAGATCTGTAATGATATATTGTCTGTCATTGATGAACACC
TAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATG
AAAGGAGATTATTATCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCG
TAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGCCACAGCTG
CAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCT
CTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCTGAGAGGGC
TTGCCACCTGGCTAAACAGCATTTGATGAGGCGATTGCTGAACTTGATAG
CCTTAATG