FC931810

Overview
NameFC931810
Unique NameFC931810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 3.504e-110
Identity = 189/204 (92.65%), Postives = 198/204 (97.06%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTND 204
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.576e-110
Identity = 188/204 (92.16%), Postives = 200/204 (98.04%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKA+V+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHLS+RPEEIGAGDQGHMFGYA+DETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTND
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTND 208
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.576e-110
Identity = 187/204 (91.67%), Postives = 199/204 (97.55%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ++TFLFTSESVNEGHPDK+CDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTK NV+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTND
Sbjct:    5 IDTFLFTSESVNEGHPDKMCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTND 208
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 5.977e-110
Identity = 188/204 (92.16%), Postives = 198/204 (97.06%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTND 204
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 5.977e-110
Identity = 188/204 (92.16%), Postives = 198/204 (97.06%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTND 204
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 5.977e-110
Identity = 187/204 (91.67%), Postives = 199/204 (97.55%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            M+TFL+TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIV  TCR+IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 MDTFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVHKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTND 204
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 7.806e-110
Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 3 
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ETFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQSPDIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 205
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 7.806e-110
Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 3 
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ETFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQSPDIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 205
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 7.806e-110
Identity = 188/204 (92.16%), Postives = 199/204 (97.55%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            M+TFL TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIVR TCR+IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 MDTFLNTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTND 204
[Close]
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.019e-109
Identity = 188/204 (92.16%), Postives = 199/204 (97.55%), Query Frame = 3 
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVR TCR+IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL++RPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTND
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTND 208
The following BLAST results are available for this feature:
BLAST of FC931810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ELAUM3.504e-11092.65S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_ATRNU4.576e-11092.16S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_BETVU4.576e-11091.67S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK_BRARP5.977e-11092.16S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU5.977e-11092.16S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK1_DAUCA5.977e-11091.67S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK_POPDE7.806e-11093.60S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK3_POPTR7.806e-11093.60S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK2_DAUCA7.806e-11092.16S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK3_ATRNU1.019e-10992.16S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionC34201D10EF PostHarveN Citrus clementina cDNA clone C34201D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931810 ID=FC931810; Name=FC931810; organism=Citrus clementina; type=EST; length=695bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGAT
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