FC931810

Overview
NameFC931810
Unique NameFC931810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.630e-109
Identity = 188/203 (92.61%), Postives = 195/203 (96.06%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ETFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQS DIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTND
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSSDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTND 205          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.630e-109
Identity = 187/203 (92.12%), Postives = 196/203 (96.55%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            +TFLFTSESVNEGHPDKLCDQISDA+LDACL QD +SKVACETCTKTNLVMVFGEITTKANV+YEKIV DTCR IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTND
Sbjct:    6 DTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIVADTCREIGFVSPDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTND 208          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.630e-109
Identity = 186/204 (91.18%), Postives = 197/204 (96.57%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            M+TFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA VNYEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVTVEY NE GAMVP+RVHTVL+STQHDETVTN+
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLVSTQHDETVTNE 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.472e-108
Identity = 187/204 (91.67%), Postives = 197/204 (96.57%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.472e-108
Identity = 186/204 (91.18%), Postives = 197/204 (96.57%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRP+GKTQVT EYYN+NGAMVPVRVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPNGKTQVTGEYYNDNGAMVPVRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.923e-108
Identity = 186/204 (91.18%), Postives = 197/204 (96.57%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFL TSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCR IGF+S DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 METFLLTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFISADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.511e-108
Identity = 186/204 (91.18%), Postives = 198/204 (97.06%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ME+FLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKANV+YE+IVR TCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEE+GAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT+EY NE+GAMVPVRVHTVLISTQHDETVTND
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 391.349 bits (1004), Expect = 2.511e-108
Identity = 187/204 (91.67%), Postives = 195/204 (95.59%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVSDDVGLDAD CKVLV IEQQSPDIAQGVHGH +K PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.279e-108
Identity = 185/204 (90.69%), Postives = 198/204 (97.06%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            M+TFLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VM+FGEITTKAN++YEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMIFGEITTKANIDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 4.283e-108
Identity = 185/204 (90.69%), Postives = 196/204 (96.08%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF SDDVGLDAD CKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNG C WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETV+ND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAEVDYEKIVRDTCRSIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSND 204          
The following BLAST results are available for this feature:
BLAST of FC931810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK5_POPTR8.630e-10992.61S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK2_DIACA8.630e-10992.12S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK1_VITVI8.630e-10991.18S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK3_SOLLC1.472e-10891.67S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK3_BRAJU1.472e-10891.18S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_SOLTU1.923e-10891.18S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK4_ARATH2.511e-10891.18S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK1_ARATH2.511e-10891.67S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK1_PICSI3.279e-10890.69S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK2_BETVU4.283e-10890.69S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionC34201D10EF PostHarveN Citrus clementina cDNA clone C34201D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931810 ID=FC931810; Name=FC931810; organism=Citrus clementina; type=EST; length=695bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGAT
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