FC931810

Overview
NameFC931810
Unique NameFC931810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.432e-105
Identity = 180/204 (88.24%), Postives = 192/204 (94.12%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITT A V+YEKIVR TCR IGF+S DVGLDAD C VLV IEQQSPDIAQGVHGHL+K+PE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAM+P+RVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTSAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMIPIRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 7.560e-105
Identity = 181/204 (88.73%), Postives = 193/204 (94.61%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YE+IVR TCR IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAG QGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGYQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTIEYRNDGGAMVPERVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 9.874e-105
Identity = 180/204 (88.24%), Postives = 192/204 (94.12%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFGEITT A V+YEKIVR TCR IGF+S DVGLDAD C VLV IEQQSPDIAQGVHGHL+K+PE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY N+ GAM+P+RVHTVLISTQHDETVTND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 4.901e-104
Identity = 181/204 (88.73%), Postives = 191/204 (93.63%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YE+IVR TCR IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDET E MP  HVLAT+LGAKLTEVRKNGTCPWLRP GKTQVTVEY N+NGAMVP RVHTVLISTQHDETV ND
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETLELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPND 204          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 8.359e-104
Identity = 180/203 (88.67%), Postives = 191/203 (94.09%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            ETFLFTSESVNEGHPDKLCDQ+SDA+LDACL QD DSKVACET TKTN+VMV GEITTKA V+YEKIVRDTCRNIGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPEE+GAGDQG MFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC W+RPDGKTQVTVEY NE+GAMVPVRVHTVLISTQHDETVTND
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVLGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLNEDGAMVPVRVHTVLISTQHDETVTND 206          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 7.093e-95
Identity = 163/204 (79.90%), Postives = 181/204 (88.73%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            +E+FL+TSESVNEGHPDK+CDQ+SDA+LDACLEQDPDSKVACETC KT +VMVFGEITTKA V+YE IVR  C+ IGF S+DVGLDAD CKVLV+IE+QSPDI QGVHG  +K  EEIGAGDQGHMFGYATDETPE MPL+HVLATQLG KLTEVRKNG CPWLRPDGKTQVTVEY  E GAM+P RVHT+LISTQH+  VTN+
Sbjct:    4 LESFLYTSESVNEGHPDKICDQVSDAVLDACLEQDPDSKVACETCCKTGMVMVFGEITTKAKVDYEAIVRKVCKEIGFTSEDVGLDADKCKVLVHIEEQSPDIGQGVHGMGTKALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNE 207          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.132e-92
Identity = 159/171 (92.98%), Postives = 168/171 (98.25%), Query Frame = 3
Query:  183 QDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            QDPDSKVACETCTKTN+VMVFGEITTK N++YEKIVRDTCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVT+EYYNENGAMVP+RVHTVLISTQHDETVTND
Sbjct:    1 QDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYNENGAMVPIRVHTVLISTQHDETVTND 171          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 336.265 bits (861), Expect = 9.586e-92
Identity = 160/177 (90.40%), Postives = 169/177 (95.48%), Query Frame = 3
Query:  165 LDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            +DACLEQD DSKVACETCTKTNLVMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGH +K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDG TQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTND
Sbjct:    3 VDACLEQDSDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGNTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTND 179          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.692e-88
Identity = 153/201 (76.12%), Postives = 175/201 (87.06%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            FLFTSESVNEGHPDKL DQISD ILDACLEQDPDSKVACET TKTN+VMVFGEITTKA V+YE +VR  CR++GF+S++ GLD +NC+VLV +  QSPDI QGVHG  +K  EEIGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LT VRK+GTCPW+ PDGKTQVT+EY NE GAM+P RVHT+LISTQH E V+N+
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLEQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISNETGLDGNNCRVLVELHDQSPDIGQGVHGMGTKSLEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMIPKRVHTILISTQHIEGVSNE 203          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.770e-88
Identity = 153/201 (76.12%), Postives = 173/201 (86.07%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            FLFTSESVNEGHPDKL DQISD ILDACL QDPDSKVACET TKTN+VMVFGEITTKA V+YE +VR  CR++GF+SD+ GLD + C+VLV +  QSPDI QGVHG  +K  E+IGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LT VRK+GTCPW+ PDGKTQVT+EY NE GAMVP RVHT+LISTQH E VTN+
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLAQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISDETGLDGNKCRVLVELHDQSPDIGQGVHGMGTKSDEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNE 203          
The following BLAST results are available for this feature:
BLAST of FC931810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_BRAJU4.432e-10588.24S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_PICSI7.560e-10588.73S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK3_ARATH9.874e-10588.24S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK_PINBN4.901e-10488.73S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK3_HORVU8.359e-10488.67S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_CHLRE7.093e-9579.90S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK3_ACTCH1.132e-9292.98S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK1_PEA9.586e-9290.40S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK_OSTTA1.692e-8876.12S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK_OSTLU3.770e-8876.12S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionC34201D10EF PostHarveN Citrus clementina cDNA clone C34201D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931810 ID=FC931810; Name=FC931810; organism=Citrus clementina; type=EST; length=695bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGAT
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