FC931810

Overview
NameFC931810
Unique NameFC931810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 5.646e-76
Identity = 138/205 (67.32%), Postives = 162/205 (79.02%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK-RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            M ++LFTSESV EGHPDK+CDQ+SDA+LDACL QDP SKVACET TKT +VM+ GEITTKANV+Y+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGV  H+ K  PE+IGAGDQGHMFGYAT+ETP  MPL+H LA++L  KLTE+R NGT  W RPD KTQVTVEY  E   + PVRVHT++ISTQHDE VTN+
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGV--HIGKVNPEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTNE 203          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.660e-75
Identity = 130/203 (64.04%), Postives = 163/203 (80.30%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            +T LFTSE V+E HPDKLCDQ+SDAILDACL  DP SKVACET +KT +VMVFGEITTK++ +Y+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGV  H+ +  +++GAGDQGHMFG+AT+ETPEFMP++HVLAT+L  ++TEVR N    W+RPD KTQVTVEY NENG ++P+R HTV+IS QH E VTN+
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGV--HVGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTNE 205          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.946e-72
Identity = 130/202 (64.36%), Postives = 161/202 (79.70%), Query Frame = 3
Query:   90 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  D
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLD 216          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.946e-72
Identity = 130/202 (64.36%), Postives = 161/202 (79.70%), Query Frame = 3
Query:   90 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  D
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLD 216          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.946e-72
Identity = 130/202 (64.36%), Postives = 161/202 (79.70%), Query Frame = 3
Query:   90 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  D
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLD 216          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.460e-72
Identity = 129/202 (63.86%), Postives = 161/202 (79.70%), Query Frame = 3
Query:   90 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            TFLFTSESV EGHPDK+CDQISDA+LDA L+QDPD+KVACET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  D
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLD 216          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.437e-72
Identity = 128/202 (63.37%), Postives = 161/202 (79.70%), Query Frame = 3
Query:   90 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            TFLFTSESV EGHPDK+CDQI+DA+LDA L+QDPD+KVACET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  D
Sbjct:   17 TFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEVCLD 216          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.545e-70
Identity = 124/203 (61.08%), Postives = 163/203 (80.30%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            +TFLFTSESV EGHPDK+CDQISDAILDACL+ DP SKVACET +KT +VMVFGEITT++ ++Y+K++R+T ++IG+   + G D   C VLV IEQQSPDIAQG+  H  K  EE+GAGDQG MFGYATDETPE +PL+ +LA +L A ++  R++G+ PWLRPD KTQVT+EY  ENGA++P RV T+++S QH ++++ +
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTE 203          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 262.692 bits (670), Expect = 1.347e-69
Identity = 131/204 (64.22%), Postives = 158/204 (77.45%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH-DETVTND 695
            +TFLFTSESV EGHPDK+CDQ+SDAILDACLEQDP SKVACET  KT ++MVFGEITTKA ++Y++IVRDT + IG+     G D   C VLV IEQQSPDIAQG+  H  K  E++GAGDQG MFGYATDETPE +PL+ +LA +L   + + R++G+ PWLRPD KTQVTVEY ++NG  VP R+ TV+IS QH DE  T D
Sbjct:    5 KTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEITTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKSLEDLGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVISAQHADEISTAD 206          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.919e-69
Identity = 124/202 (61.39%), Postives = 159/202 (78.71%), Query Frame = 3
Query:   90 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            +FLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT ++MVFGEITTKA+++Y+KI+R+  ++IG+     G D   C VLV IEQQSPDIAQG+  H  K  EE+GAGDQG MFGYATDETPE +PL+ +LA QL A + + R++G+ PWLRPD KTQVT+EY ++ GA+VP +V TV++S QH E +T +
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEYEHDGGAVVPKKVKTVVVSAQHSEDITTE 212          
The following BLAST results are available for this feature:
BLAST of FC931810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DICDI5.646e-7667.32S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_ACACA3.660e-7564.04S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK2_PONAB4.946e-7264.36S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA4.946e-7264.36S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN4.946e-7264.36S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE6.460e-7263.86S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT8.437e-7263.37S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_SCHPO3.545e-7061.08S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK2_YEAST1.347e-6964.22S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_ASCIM3.919e-6961.39S-adenosylmethionine synthetase OS=Ascobolus immer... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34201D10EF PostHarveN Citrus clementina cDNA clone C34201D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931810 ID=FC931810; Name=FC931810; organism=Citrus clementina; type=EST; length=695bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGAT
back to top