FC931833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PSEPF (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 55/224 (24.55%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + +R+F + VP V+WD+ KVL +E + G+++ +L L Q + +A R +E + Q+ + FFHAD HPGN+ V I D G++G + ++ L +A +++D ++V Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L PD L A P+ + Sbjct: 212 NASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIF-EKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PSEF5 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 55/224 (24.55%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + +R+F + VP V+WD+ KVL +E + G+++ +L L Q + +A R +E + Q+ + FFHAD HPGN+ V I D G++G + ++ L +A +++D ++V Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L PD L A P+ + Sbjct: 212 NASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTVQPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIF-EKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_CITK8 (Probable ubiquinone biosynthesis protein ubiB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 53/224 (23.66%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VP V+ DY + ++ +E + G+ ++++ L+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYVPEVYSDYCSQDMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEDO (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.587e-18 Identity = 53/224 (23.66%), Postives = 109/224 (48.66%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + VP ++ D + T+++ +E + G+ +++L AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D +++ Q ++ + D+ + ++++ + + ++ P + + + LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFLDSDALYVPYIYEDLSFTRLIVMERIYGIAVSDLSALKAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPDNPYYIGLDCGIMGTLTDVDKRYLAENFLAFFNRDYQRIAQLHLESGWVSEHTDIVAFEQAIKIVCEPMFNK-PLAEISFGHVLLALFRTARQFNMVVQPQLVLLQKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PSE14 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.587e-18 Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 N+ + RR+F + VP V+WD+ KVL +E + G+++ ++ L Q + +A R +E + QI + FFHAD HPGN+ V I D G++G + ++ L +A +++D ++V Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L PD L A PY + Sbjct: 212 NSSQLRRNFEGSDLLYVPQVYWDWCRPKVLVMERIYGLQVTDMAGLADQRTDMKLLAERGVEIFFTQIFRDSFFHADMHPGNIFVSTVNPWSPKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIF-EKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWSTAQPYLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHESR (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-7) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18 Identity = 51/224 (22.77%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + +P V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHESM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-4) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18 Identity = 51/224 (22.77%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + +P V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PSEE4 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas entomophila (strain L48) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.119e-18 Identity = 56/224 (25.00%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + VP V+WD KVL +E + GV + ++ L Q + +A R +E + Q+ + FFHAD HPGN+ V I D G++G + + ++ L A +++D ++V Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L PD L A P+ + Sbjct: 213 NASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMATLADQRTDMKMLAERGVEVFFTQVFRDSFFHADMHPGNIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSGWVPAQTKVNEFEAAIRTVCEPIF-EKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWSTAKPFLE 435
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_ESCF3 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.119e-18 Identity = 52/224 (23.21%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + +P V+ DY + ++ +E + G+ ++++ AL+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHIFL (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri GN=ubiB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.992e-18 Identity = 52/224 (23.21%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + +P V+ DY + ++ +E + G+ ++++ AL+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434 The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bpback to top |