FC931855

Overview
NameFC931855
Unique NameFC931855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length421
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:447..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 7.076e-54
Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISDSAKDLIRKML   PSERL AHEVL HPWICENGVA D++LDP+V+SRLKQFSAMNKLKK+ALRVIAE LSEEEIAGL+EMFKA+DT N G ITF EL+ GLRR+G+  KDTEI D+M+AA  DN+ TI Y EFIAAT
Sbjct:  306 ISDSAKDLIRKMLSHCPSERLKAHEVLRHPWICENGVATDQALDPSVISRLKQFSAMNKLKKLALRVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFIAAT 445          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.276e-52
Identity = 102/140 (72.86%), Postives = 121/140 (86.43%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDLI+KML S P +RLTAH+VLCHPWI ++ VAPD+ LD AV+SRLK+FSAMNKLKKMALRVIAE LSEEEI GLKE+FK +DTD SG ITF+ELK  +RR GS L ++EI++L+ AADVD SGTIDYGEF+AAT
Sbjct:  249 ISESAKDLIKKMLESNPKKRLTAHQVLCHPWIVDDKVAPDKPLDCAVVSRLKKFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQELLRAADVDESGTIDYGEFLAAT 388          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 6.623e-52
Identity = 101/139 (72.66%), Postives = 118/139 (84.89%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            +S+SAKDL+R+ML   P +R+T HEVLCHPW   +GVA D+ LD AVLSRL+QFSAMNKLKK+A++VIAESLSEEEIAGLKEMFK +DTDNSG IT +ELK GL R G+ LKD+EI  LM AAD+DNSGTIDYGEFIAA
Sbjct:  361 VSESAKDLVRRMLIRDPKKRMTTHEVLCHPWARVDGVALDKPLDSAVLSRLQQFSAMNKLKKIAIKVIAESLSEEEIAGLKEMFKMIDTDNSGHITLEELKKGLDRVGADLKDSEILGLMQAADIDNSGTIDYGEFIAA 499          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 6.199e-50
Identity = 100/139 (71.94%), Postives = 117/139 (84.17%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            ISDSAKDLI+KMLC  PSERL AHEVL HPWIC+NGVA +R+LDP+VL RLKQFSAMN+LKK++L++IAE LSEEEI GL+EMFKAMDT N   +TF ELK GL+RY S  KDTEI DLM+AAD D + TI++ EFIAA
Sbjct:  300 ISDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATNRALDPSVLPRLKQFSAMNRLKKLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELK-GLKRYSSVFKDTEINDLMEAAD-DTTSTINWEEFIAA 436          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.912e-47
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            +SD AKDL+RKML   P +RLTA EVL HPWI E+G A D+ LD AVLSR+KQF AMNKLKKMAL+VIAE+LSEEEI GLKEMFK++DTDN+G +T +EL+ GL + GS + + EIR LM+AAD+D  G+IDY EFI+AT
Sbjct:  305 LSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMDGDGSIDYLEFISAT 444          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 6.415e-47
Identity = 95/140 (67.86%), Postives = 110/140 (78.57%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS  AKDL+RKML S P +RLTA +VL HPWI E+G APD  LD AV+SRLKQF AMN  KK+ALRVIA  LSEEEI GLKEMFK MDTDNSG IT +EL+ GL + G+ L + E++ LM+AAD D +GTIDYGEFIAAT
Sbjct:  295 ISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAAT 434          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.429e-46
Identity = 94/140 (67.14%), Postives = 113/140 (80.71%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+RKML   P  R+TA +VL HPWI + G APD+ +D AVLSR+KQF AMNKLKK+AL+VIAESLSEEEI GLK MF  +DTD SG IT++ELK GL R GS L +TE++ LM+AADVD +GTIDY EFI+AT
Sbjct:  307 ISESAKDLVRKMLTKDPKRRITAAQVLEHPWI-KGGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISAT 445          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 5.430e-46
Identity = 91/140 (65.00%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            +S+SAKDL+RKML   P  R+T+ +VL HPW+ E G A D+ +D AVLSR+KQF AMNKLK++AL+VIAESLSEEEI GLK MF  MDTD SG IT++ELK+GL R GS L + E++ LMDAADVD +GTIDY EFI AT
Sbjct:  308 VSNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEFITAT 447          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.430e-46
Identity = 93/140 (66.43%), Postives = 110/140 (78.57%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS  AKDL++KML S P +RLTA +VL HPWI E+G APD  LD AV+SRLKQF AMN  KK+ALRVIA  LSEEEI GLKEMFK MDTD+SG IT +EL+ GL + G+ L + E++ LM+AAD D +GTIDYGEFIAAT
Sbjct:  300 ISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAAT 439          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.580e-45
Identity = 90/140 (64.29%), Postives = 112/140 (80.00%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+RKML   P +RLT+ +VL H W+ E G A D+ +D AVLSR+KQF AMNKLKKMAL+VIA +L+EEEI GLK+MF  MDTDNSG IT++ELKAGL + GS L + E++ LM+AADVD +G+IDY EFI AT
Sbjct:  292 ISESAKDLVRKMLTRDPKKRLTSAQVLQHQWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITAT 431          
The following BLAST results are available for this feature:
BLAST of FC931855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CDPKB_ORYSJ7.076e-5476.43Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CDPKC_ARATH2.276e-5272.86Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPKK_ARATH6.623e-5272.66Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK1_ORYSJ6.199e-5071.94Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
CDPK3_ARATH4.912e-4766.43Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKY_ARATH6.415e-4767.86Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKL_ARATH1.429e-4667.14Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPK_DAUCA5.430e-4665.00Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPKH_ARATH5.430e-4666.43Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPK2_MAIZE1.580e-4564.29Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34201H08EF PostHarveN Citrus clementina cDNA clone C34201H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931855 ID=FC931855; Name=FC931855; organism=Citrus clementina; type=EST; length=421bp
AATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAAC
CGTCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGT
GAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCG
TCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGG
TTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTAAAGGAAATG
TTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACATTTGATGAACT
CAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGATACAGAGATAC
GTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAACTATTGATTAT
GGAGAATTTATAGCTGCNACT
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