FC931855

Overview
NameFC931855
Unique NameFC931855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length421
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:447..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 7.841e-45
Identity = 89/140 (63.57%), Postives = 113/140 (80.71%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+RKML   P +R+T+ +VL HPW+  +G A D+ +D AVLSR+KQF AMNKLKKMAL+VIA +L+EEEI GLK+MF  MDTDNSG IT++ELKAGL + GS L + E++ LM+AADVD +G+IDY EFI AT
Sbjct:  312 ISESAKDLVRKMLTQDPKKRITSAQVLQHPWL-RDGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITAT 450          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.747e-44
Identity = 90/140 (64.29%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+RK+L   P +R++A + L HPWI   G APD+ +D AVLSR+KQF AMNKLKK+AL+VIAESLSEEEI GLK MF  MDTD SG IT++ELK GL + GS L + E++ LM+AADVD +GTIDY EFI+AT
Sbjct:  329 ISESAKDLVRKLLTKDPKQRISAAQALEHPWI-RGGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAADVDGNGTIDYIEFISAT 467          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 5.083e-44
Identity = 87/140 (62.14%), Postives = 109/140 (77.86%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+R+ML   P  R++A EVL HPW+ E G A D+ +D AVLSR+KQF AMNKLKK+AL+VIAE++  EEI GLK MF  +DTDNSG IT++ELK GL + GS L + E++ LMDAADVD +G+IDY EFI AT
Sbjct:  300 ISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITAT 439          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 8.670e-44
Identity = 90/140 (64.29%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDLIRKML   P +R+TA E L HPW+ +  ++ D+ ++ AVL R+KQF AMNKLKK+AL+VIAE+LSEEEI GLK+ FK MDTD SG ITFDEL+ GL R GS L ++EI+ LM+AADVD SGTIDY EF+ AT
Sbjct:  312 ISESAKDLIRKMLIRDPKKRITAAEALEHPWMTDTKIS-DKPINSAVLVRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTAT 450          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.132e-43
Identity = 86/140 (61.43%), Postives = 109/140 (77.86%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS SAKDL+R+ML + P  R++A +VL HPW+ E G A D+ +D AVLSR+KQF AMNKLKK+AL+VIAE++  EEI GLK MF  +DTDNSG IT++ELK GL + GS L + E++ LMDAADVD +G+IDY EFI AT
Sbjct:  318 ISSSAKDLVRRMLTADPKRRISAADVLQHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITAT 457          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.135e-42
Identity = 85/140 (60.71%), Postives = 107/140 (76.43%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS+SAKDL+R ML   P +R TA +VL HPWI E G A D+ +D AVLSR+KQ  AMNKLKK+A + IA++L EEE+ GLK MF  MDTD SG IT+DELK+GL + GS L +TE++ L++ ADVD +GTIDY EFI+AT
Sbjct:  326 ISESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISAT 465          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 2.789e-42
Identity = 88/140 (62.86%), Postives = 109/140 (77.86%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS  AK LI KML  +P ER++A +VL HPW+     APD+ +D  VLSR+KQF AMNKLKK+AL+VIAE LSEEEI GLK MF+ MD D SG+IT++ELK GL R+GS L +TE++ LM+AADVD +GTIDY EFI+AT
Sbjct:  274 ISFKAKHLIGKMLTKKPKERISAADVLEHPWM--KSEAPDKPIDNVVLSRMKQFRAMNKLKKLALKVIAEGLSEEEIKGLKTMFENMDMDKSGSITYEELKMGLNRHGSKLSETEVKQLMEAADVDGNGTIDYIEFISAT 411          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.869e-41
Identity = 84/140 (60.00%), Postives = 108/140 (77.14%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISDSAKDL+ KML   P  R+TA +VL HPWI + G AP++ +D  VLSR+KQF AMNKLKK+AL+V A SLSEEEI GLK +F  MDT+ SG IT+++L+ GL R  S L +TE++ L++A+DVD +GTIDY EFI+AT
Sbjct:  296 ISDSAKDLVEKMLTEDPKRRITAAQVLEHPWI-KGGEAPEKPIDSTVLSRMKQFRAMNKLKKLALKVSAVSLSEEEIKGLKTLFANMDTNRSGTITYEQLQTGLSRLRSRLSETEVQQLVEASDVDGNGTIDYYEFISAT 434          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.443e-38
Identity = 83/140 (59.29%), Postives = 102/140 (72.86%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            I   AK L+ +ML   P ER++A EVL HPW+ ++G A D+ +D  VLSRLKQF  MNKLKK+AL+VIA +LSEEEI GLK +F  +DTD SG IT +ELK GL R GS L  TE+  LM+AADVD +GTID  EFI+AT
Sbjct:  259 IDVKAKHLVNRMLNRNPKERISAAEVLGHPWM-KDGEASDKPIDGVVLSRLKQFRDMNKLKKVALKVIAANLSEEEIKGLKTLFTNIDTDKSGTITLEELKTGLTRLGSNLSKTEVEQLMEAADVDGNGTIDIDEFISAT 397          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKP_ARATH (Calcium-dependent protein kinase 25 OS=Arabidopsis thaliana GN=CPK25 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.443e-38
Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMD-AADVDNSGTIDYGEFIAA 418
            +S+SAKDLIRKML   P +RLTA +VLCHPWI + G APD  LD  VLSRLK+FSA +KLKKMALRVIAE LSEEEI  L+E FK +D+  SG +T+ ELK GL R+ + L +++I  LM    DV    T+DY EFI A
Sbjct:  359 VSESAKDLIRKMLERNPIQRLTAQQVLCHPWIRDEGNAPDTPLDTTVLSRLKKFSATDKLKKMALRVIAERLSEEEIHELRETFKTIDSGKSGRVTYKELKNGLERFNTNLDNSDINSLMQIPTDVHLEDTVDYNEFIEA 498          
The following BLAST results are available for this feature:
BLAST of FC931855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CDPK2_ORYSJ7.841e-4563.57Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPKF_ARATH1.747e-4464.29Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]
CDPKX_ARATH5.083e-4462.14Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
CDPKT_ARATH8.670e-4464.29Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CDPK9_ARATH1.132e-4361.43Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDPKJ_ARATH2.135e-4260.71Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
CDPKM_ARATH2.789e-4262.86Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]
CDPKN_ARATH6.869e-4160.00Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CDPKV_ARATH2.443e-3859.29Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPKP_ARATH2.443e-3859.29Calcium-dependent protein kinase 25 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34201H08EF PostHarveN Citrus clementina cDNA clone C34201H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931855 ID=FC931855; Name=FC931855; organism=Citrus clementina; type=EST; length=421bp
AATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAAC
CGTCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGT
GAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCG
TCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGG
TTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTAAAGGAAATG
TTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACATTTGATGAACT
CAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGATACAGAGATAC
GTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAACTATTGATTAT
GGAGAATTTATAGCTGCNACT
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