FC931855

Overview
NameFC931855
Unique NameFC931855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length421
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:447..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.751e-36
Identity = 78/140 (55.71%), Postives = 99/140 (70.71%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            +SDSAKDL+RKML   P +RLTA +VL H WI     AP+ SL   V +RLKQFS MNKLKK ALRVIAE LS EE AG+KE F+ MD +  G I  +ELK GL++ G  + DT+++ LM+A DVD  GT++Y EF+A +
Sbjct:  286 VSDSAKDLVRKMLEPDPKKRLTAAQVLEHTWILNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEAAGIKEAFEMMDVNKRGKINLEELKYGLQKAGQQIADTDLQILMEATDVDGDGTLNYSEFVAVS 425          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.936e-35
Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 415
            IS+SAK L+++ML   P++RLTA +VL HPWI     AP+  L   V SRLKQFS MN+ KK  LRVIAE LS +E+  +K MF  MD D  G IT+ ELKAGL++ GS L + EI+ LM+ ADVD +G +DYGEF+A
Sbjct:  290 ISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKKAPNVPLGDIVRSRLKQFSMMNRFKKKVLRVIAEHLSIQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVA 427          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.528e-35
Identity = 77/141 (54.61%), Postives = 102/141 (72.34%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            +S++AKDL+RKML   P +RL+A +VL H WI     AP+ SL   V +RLKQFS MNKLKK ALRVIAE LS EE+AG+KE F+ MD+  +G I  +ELK GL + G   + DT+++ LM+AADVD  GT++YGEF+A +
Sbjct:  284 VSETAKDLVRKMLEPDPKKRLSAAQVLEHSWIQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGDGTLNYGEFVAVS 424          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 7.356e-35
Identity = 73/140 (52.14%), Postives = 98/140 (70.00%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS++AK+L+R+ML   P  RLTA +VL HPWI     AP+  L   V SRLKQFS MN+ K+ ALRVIAE LS EE+  +K MF  MDTDN G ++ +ELKAGLR + + L ++E++ L++A D    GT+DYGEF+A +
Sbjct:  281 ISETAKNLVRQMLEPDPKRRLTAKQVLEHPWIQNAKKAPNVPLGDVVKSRLKQFSVMNRFKRKALRVIAEFLSTEEVEDIKVMFNKMDTDNDGIVSIEELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVS 420          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 2.795e-34
Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 2
Query:   23 LIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            L+++ML   P ER++A EVL HPW+ E G A D+ +D  VLSRLK+F   NK KK+ L+ IA +LSEEEI GLK +F  +DTD SG IT +ELK GL R GS L  TE+  LM+AAD+D +GTID  EFI+AT
Sbjct:  266 LVKRMLDRNPKERISAAEVLGHPWMKE-GEASDKPIDGVVLSRLKRFRDANKFKKVVLKFIAANLSEEEIKGLKTLFTNIDTDKSGNITLEELKTGLTRLGSNLSKTEVEQLMEAADMDGNGTIDIDEFISAT 397          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.228e-34
Identity = 75/138 (54.35%), Postives = 99/138 (71.74%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 415
            IS+SAK L+++ML    ++RLTA +VL HPWI     AP+  L   V SRLKQFS MN+LKK ALRVIAE LS +E+  ++ MF  MD DN G I++ EL+AGLR+ GS L + EI+ LM+ ADV+ +G +DYGEF+A
Sbjct:  286 ISESAKSLVKQMLEPDSTKRLTAQQVLDHPWIQNAKKAPNVPLGDIVRSRLKQFSMMNRLKKKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVA 423          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.133e-34
Identity = 73/138 (52.90%), Postives = 94/138 (68.12%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 415
            +S++AKDLIRKML      RLTA +VL HPW+     AP+ SL   V +RLKQF+ MNKLKK ALRVIAE LS+EE +G++E F+ MDT   G I  DELK GL++ G  +   +++ LMDA D+D  G +D  EFIA
Sbjct:  290 VSENAKDLIRKMLDPDQKRRLTAQQVLDHPWLQNAKTAPNVSLGETVRARLKQFTVMNKLKKRALRVIAEHLSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIA 427          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.366e-33
Identity = 76/138 (55.07%), Postives = 92/138 (66.67%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIA 415
            +SD+AKDLI+KML   P  RLTA +VL HPWI     A + SL   V +RLKQFS MNKLKK ALRVIAE LS EE + +KE F+ MDT N G IT  EL  GL++ G  +   +I+ LMDA DVD  G +D  EF+A
Sbjct:  281 VSDNAKDLIKKMLHPDPRRRLTAQQVLDHPWIQNGKNASNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVVPQDDIQILMDAGDVDKDGYLDVNEFVA 418          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.708e-29
Identity = 60/137 (43.80%), Postives = 92/137 (67.15%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFI 412
            +S  AK+L++ ML + P  RLT  EVL HPWI     AP+ +L   V ++++QF  MN+ KK  LR++A++L  EEIA + +MF+ MDTD +G +TF+EL+ GL++ G  + D +++ LMDAAD D +G +   EF+
Sbjct:  293 VSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLGDNVRTKIQQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFV 429          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKG_ARATH (Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.486e-27
Identity = 57/140 (40.71%), Postives = 93/140 (66.43%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            IS+SAKD ++K+L   P  RLTA + L HPW+ E G A +  +D +VL+ ++QF   ++LK+ ALR +A +L EEE+A L++ F A+D D +G I+ +E++  L + +   LKD  + +++ A D +  G +D+GEF+AA
Sbjct:  337 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVDFGEFVAA 476          
The following BLAST results are available for this feature:
BLAST of FC931855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CDPK7_ARATH1.751e-3655.71Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKA_ARATH1.936e-3555.07Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPK8_ARATH2.528e-3554.61Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPKD_ARATH7.356e-3552.14Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKR_ARATH2.795e-3456.39Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPKU_ARATH6.228e-3454.35Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKW_ARATH8.133e-3452.90Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKE_ARATH2.366e-3355.07Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPKO_ARATH2.708e-2943.80Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPKG_ARATH1.486e-2740.71Calcium-dependent protein kinase 16 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34201H08EF PostHarveN Citrus clementina cDNA clone C34201H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931855 ID=FC931855; Name=FC931855; organism=Citrus clementina; type=EST; length=421bp
AATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAAC
CGTCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGT
GAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCG
TCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGG
TTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTAAAGGAAATG
TTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACATTTGATGAACT
CAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGATACAGAGATAC
GTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAACTATTGATTAT
GGAGAATTTATAGCTGCNACT
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