FC931855

Overview
NameFC931855
Unique NameFC931855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length421
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:447..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKS_ARATH (Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.659e-26
Identity = 57/140 (40.71%), Postives = 91/140 (65.00%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            ISDSAKD ++K+L   P  RLTA + L H W+ E G A D  +D +VL+ L+QF   ++LK+ ALR +A +L E EI+ L++ F A+D D +G I+ +E++  L +     LKD+ + ++++A D +  G +D+ EF+AA
Sbjct:  291 ISDSAKDFVKKLLVKDPRARLTAAQALSHAWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDVDKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAA 430          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPKI_ARATH (Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.842e-24
Identity = 50/140 (35.71%), Postives = 92/140 (65.71%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRR-YGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            IS+ AKD ++K+L  +P  RLTA + L H W+ E G A +  +D +VL+ ++QF   ++LK++ALR +A++++E+E+  L++ F A+D D +G+I+ +E++  L +     LKD  + +++ A D +  G +D+ EF+ A
Sbjct:  300 ISNGAKDFVKKLLVKEPRARLTAAQALSHSWVKEGGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDDLRDQFDAIDIDKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVA 439          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.544e-21
Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR-SLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS  AK+LI K+L   P+ER T  E L HPWI +   + +   L   +L  LK F   N+LKK+AL +IA+ L + EI  L+ +F A+D DNSG ++  E+  GL++ G      +I  ++   D + SG I Y +F+AAT
Sbjct:  295 ISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT 435          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAF7 (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate 3D7) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.544e-21
Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDR-SLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAAT 421
            IS  AK+LI K+L   P+ER T  E L HPWI +   + +   L   +L  LK F   N+LKK+AL +IA+ L + EI  L+ +F A+D DNSG ++  E+  GL++ G      +I  ++   D + SG I Y +F+AAT
Sbjct:  295 ISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT 435          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.261e-18
Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVA--PDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            IS+ AKDLI++ L     +R+ A E L HPW  +   A   D  +D  VL   K +  + K +K+A+ +IA+  ++ ++  LK  F  +D D  G IT ++LK GL + G  L       L+D  D D SG IDY EFIAA
Sbjct:  342 ISEEAKDLIKRCLTMDADKRICASEALQHPWFKKKKYAFNMDMKMDIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKL-PYNFDLLLDQIDSDGSGKIDYTEFIAA 481          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAYO (Calcium-dependent protein kinase 3 OS=Plasmodium yoelii yoelii GN=CPK3 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.646e-18
Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI--CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            ISD AKDLI++ L     +R+ A E L HPW    +     D  +D  VL   K ++ + KL+K+A+ +IA+  ++ ++  LK +F  +D D  G IT ++LK GL   G  L       L+D  D D SG IDY EF+AA
Sbjct:  336 ISDEAKDLIKRCLTIDSGKRINASEALKHPWFKKKKGSFNLDVKMDIHVLENFKNYALLLKLQKLAMTIIAQQSNDYDLQQLKAVFLYLDEDGKGNITKNQLKKGLENSGLKLPQ-NFDVLLDQIDSDGSGRIDYTEFLAA 475          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CRK_DAUCA (CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.796e-15
Identity = 44/140 (31.43%), Postives = 79/140 (56.43%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGS-TLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            +S  AKD ++++L   P +R+TA + LCH WI +N       LD  V   +K +   + L+K ALR ++++L+ +E+  LKE F  ++   +G I+ + +K  L R  +  +KD+ + DL+ + +      +D+ EF AA
Sbjct:  379 VSSEAKDFVKRLLNKDPRKRMTAAQALCHSWI-KNSNDIKFPLDILVFKLMKVYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPTKNGTISLENIKQALMRNSTDAMKDSRVLDLLVSLNALQYRRMDFEEFCAA 517          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CAMK1_ORYSJ (Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.060e-13
Identity = 43/142 (30.28%), Postives = 77/142 (54.23%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI--CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYG-STLKDTEIRDLMDAADVDNSGTIDYGEFIAA 418
            +S  AKD +R++L     +R+TA + LCHPWI   E    P   LD  +   ++ + + + L++ ALR +A++L+ ++I  L+E F+ +  + S  IT   LK  L +   + +KD+ + D ++         +D+ EF AA
Sbjct:  378 LSAEAKDFVRRLLNKDYRKRMTAAQALCHPWIRGTEEVKLP---LDMIIYRLMRAYISSSSLRRAALRALAKTLTTDQIYYLREQFELIGPNKSDLITLQNLKTALMKNSTNAMKDSRVVDFVNTISNIQYRKLDFEEFSAA 516          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAYO (Calcium-dependent protein kinase 4 OS=Plasmodium yoelii yoelii GN=CPK4 PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 48/153 (31.37%), Postives = 77/153 (50.33%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWI----CENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAG----LRRYGSTLKD-------TEIRDLMDAADVDNSGTIDYGEFI 412
            ISD AKDLI+KML    + R++A + L H WI     ++ V  D       ++ +KQF +  KL + AL  +   L+  +E   L ++FK MD +  G +  +EL  G    L+  G    D        E+  ++ + D+D +G I+Y EF+
Sbjct:  297 ISDKAKDLIKKMLMYTSAVRISARDALEHEWIRLMTSKDNVNIDIPSLELSITNIKQFQSTQKLAQAALLYMGSKLTTIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFL 449          
BLAST of FC931855 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAF7 (Calcium-dependent protein kinase 4 OS=Plasmodium falciparum (isolate 3D7) GN=CPK4 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 47/156 (30.13%), Postives = 82/156 (52.56%), Query Frame = 2
Query:    2 ISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLD-PAV---LSRLKQFSAMNKLKKMALRVIAESLSE-EEIAGLKEMFKAMDTDNSGAITFDELKAG----LRRYGSTLKDT-------EIRDLMDAADVDNSGTIDYGEFIAAT 421
            ISD AKDLI+KML    + R++A + L H WI       + ++D P++   ++ ++QF +  KL + AL  +   L+  +E   L ++FK MD +  G +  +EL  G    L+  G    D        E+  ++++ D+D +G I+Y EF+  +
Sbjct:  297 ISDKAKDLIKKMLMYTSAVRISARDALEHEWIKMMTSKDNLNIDIPSLELSIANIRQFQSTQKLAQAALLYMGSKLTTIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGEDTSDLDNAAIEYEVDQILNSIDLDQNGYIEYSEFLTVS 452          
The following BLAST results are available for this feature:
BLAST of FC931855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CDPKS_ARATH3.659e-2640.71Calcium-dependent protein kinase 28 OS=Arabidopsis... [more]
CDPKI_ARATH5.842e-2435.71Calcium-dependent protein kinase 18 OS=Arabidopsis... [more]
CDPK2_PLAFK3.544e-2139.72Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CDPK2_PLAF73.544e-2139.72Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CDPK3_PLAF71.261e-1838.30Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]
CDPK3_PLAYO1.646e-1838.30Calcium-dependent protein kinase 3 OS=Plasmodium y... [more]
CRK_DAUCA3.796e-1531.43CDPK-related protein kinase OS=Daucus carota GN=CR... [more]
CAMK1_ORYSJ6.060e-1330.28Calcium/calmodulin-dependent serine/threonine-prot... [more]
CDPK4_PLAYO2.546e-1131.37Calcium-dependent protein kinase 4 OS=Plasmodium y... [more]
CDPK4_PLAF72.546e-1130.13Calcium-dependent protein kinase 4 OS=Plasmodium f... [more]

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Properties
Property NameValue
Genbank descriptionC34201H08EF PostHarveN Citrus clementina cDNA clone C34201H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931855 ID=FC931855; Name=FC931855; organism=Citrus clementina; type=EST; length=421bp
AATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTATGCTCTCAAC
CGTCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCCCTGGATCTGT
GAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTGTACTTTCTCG
TCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCTTTACGGG
TTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTAAAGGAAATG
TTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACATTTGATGAACT
CAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGATACAGAGATAC
GTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAACTATTGATTAT
GGAGAATTTATAGCTGCNACT
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