FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.403e-21 Identity = 64/186 (34.41%), Postives = 103/186 (55.38%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPGRFDR++ + +P + GR++IL+VH+R K +A DVD+ +A T G GA+L N++ AAI R EI+ D++ A + G ++K S E R VA +EA A+V P+ + ++I PR G+ G + + G+ SR L + + V L R A+E+ G+ ++T Sbjct: 387 LLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP-EKKNAVVSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTT 570
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.445e-20 Identity = 63/186 (33.87%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPG+FDR++ + +P + GR+ IL+VH+R K +A DVD+ +A T G GA+L N++ AAI R EI+ D++ A + G ++K S E + VA +EA A+V P+ + ++I PR G+ G + + G+ SR L + + V L R A+E+ GE ++T Sbjct: 385 LLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP-EKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEDNVTT 568
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 71/203 (34.98%), Postives = 108/203 (53.20%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L RPGRFDR I +P P + GR EIL+++ + KPM++DVD A+A T G GA+LAN+V +AAI +G +++++ L A G +RK S ++ + A +E+ A+VA+N I TI PR G LG V + E +S++ LL + V + R A+EL G ++T + A A+ V Sbjct: 513 LTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMG-TERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPR-GSALGMVTQLPSN---DETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMV 710
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 64/186 (34.41%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPGRFDR++ + +P + GR++IL+VH+R K + DVD+ VA T G GA+L N++ AAI R EI+ D++ A + G ++K S E R VA +EA A+V P+ + ++I PR G+ G + + G+ SR L + + V L R A+E+ G+ ++T Sbjct: 417 LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGP-EKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTT 600
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 62/186 (33.33%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPGRFDR++ + +P + GR++IL+VH+R K + DVD+ +A T G GA+L N++ AAI R EI+ D++ A + G ++K S E + VA +EA A+V P+ + ++I PR G+ G + + G+ SR L + + V L R A+E+ G+ ++T Sbjct: 408 LLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGP-EKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTT 591
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 63/178 (35.39%), Postives = 99/178 (55.62%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV--RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 526 L+RPGRFDRK+ + +P + GR ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+ +A G + + + R+ VA +EA +V + + + + VTI PR GR GY+ K D M +LS++ + + + + R A+E+ Sbjct: 342 LLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPR-GRAGGYMIALPKEDQM-----LLSKEDMKEQLAGLMGGRVAEEI 513
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 63/178 (35.39%), Postives = 99/178 (55.62%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV--RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 526 L+RPGRFDRK+ + +P + GR ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+ +A G + + + R+ VA +EA +V + + + + VTI PR GR GY+ K D M +LS++ + + + + R A+E+ Sbjct: 342 LLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPR-GRAGGYMIALPKEDQM-----LLSKEDMKEQLAGLMGGRVAEEI 513
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 68/181 (37.57%), Postives = 99/181 (54.70%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 538 L+RPGRFDR+I + +P + GR E+LKVHAR KP+ DDV+ +A+ T G GA+L N++ AA+ R T+I+ + +A G +K R SP+ + VA +EA VV V + + VTI PR G GY M ++ +++ LLD I L R A+E+ GE Sbjct: 321 LLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPA-KKSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPR-GMAGGYAVMLPKEDRY---FMTQPELLDKIIGLLGGRVAEEVTFGE 496
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 538 L+RPGRFDR++ + +P L GR IL++HA+ +A +VD AVA +T G GA+LAN+V AA+ +R GR ++ DL +A + G L +K R E R +A +E A+ + +TI PR LGY + +++ Q LL + V L+ RAA+ + GE Sbjct: 295 LLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIG-LQKKSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYT---FHIPEDDRHIVTEQQLLAEVDVLLSGRAAEFVAFGE 471
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 62/186 (33.33%), Postives = 103/186 (55.38%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPGRFDR++ + +P + GR++IL+VH+R K +A DVD+ +A T G G +L N++ AAI R EI+ D++ A + G ++K S E + VA +EA A+V P+ + ++I PR G+ G + + G+ SR L + + V L R A+E++ G+ ++T Sbjct: 408 LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGP-EKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVF-GQDNVTT 590 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |