FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18 Identity = 61/185 (32.97%), Postives = 99/185 (53.51%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ------IEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 538 L+RPGRFDR+I + +P +IGR +LKVHAR KP+ + V+ ++A T G GA+L N++ AA+ R + +I D+ +A ++ ++ +KER+ VA +E V+ + + + VTI PR G+ GY M ++ + ++ LLD I L R A+E+ GE Sbjct: 316 LLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERN-----IVAYHEGGHTVIGLVLDEADMVHKVTIVPR-GQAGGYAVMLPREDRYFQ---TKPELLDKIVGLLGGRVAEEIIFGE 491
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 69/209 (33.01%), Postives = 105/209 (50.24%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK-ERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSD 622 L+RPGRFDR+I + P + GR +ILKVH +K V +A T G GAELAN+V AA+ R G+ E+ D+ +A G+ R S + R A +E A+V + P + TI PR G LG V+ + ++ + +R+ + I V +A R A+E+ G ++++ + A + AR V GLSD Sbjct: 310 LLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPLHKATIIPR-GNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSD 514
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 73/216 (33.80%), Postives = 107/216 (49.54%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDXHFGLSN 643 L+RPGRFDR+I + P L GR +L+VH++ KP+ADD D +A T GM GA+LAN+V AA+ R+ IT L +A G RK R S + + A +E + A PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL E + + A AR+ V FG+S+ Sbjct: 318 LLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFREPTTGAV--SDIEKATKIARSMV------TEFGMSS 520
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 61/179 (34.08%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP-RAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 535 L+RPGRFDR+I + P + GR+ ILKVH++KK + DV +A T G GA+LAN++ AAI +R G+ EIT ++ + G+ R +A +EA AV A P ++ VT+ P R + L + D ++S+ +L I LA RA +E+ G Sbjct: 326 LLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEGSPLADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQF-----LVSKSQILSKIIAALAGRAMEEIVFG 499
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 68/191 (35.60%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKK--PMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAVNFPDL----KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L RPGRFDR + + P IGR IL+VH KK P+ DDV+ ++ASMT G GA+LAN+V AA+ R +T + D +QA + G+ + R + VA +EA AVV +L +E ++I PR G LG+ + +L LL + L RAA+E+ G++ST Sbjct: 481 LRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFT--YIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEV-VYSGRIST 668
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.658e-18 Identity = 76/214 (35.51%), Postives = 107/214 (50.00%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT---DDLLQ--AAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV-RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 622 L+RPGRFDR++ + P + GR EILKVH K DV +A T G GA+LAN++ AAI R GRT I++ DD + A +E M D K +S VA +E A+ P ++ VT+ PR G+ G + MD ++SRQ L I L RAA+E+ GE +++T A A+ V+ G+SD Sbjct: 369 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDGKSKS-----LVAYHEVGHAICGTLTPGHDPVQKVTLIPR-GQARGLTWFIPMD----DPTLISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAKQMVVTFGMSD 572
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.136e-17 Identity = 66/205 (32.20%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFD ++ +P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L + +++ ++ + RS E + A +E+ A++A D I TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A+ V Sbjct: 492 LIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 689
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.136e-17 Identity = 54/141 (38.30%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 421 L+RPGRFDRK+ + P + GR +LKVHA+ KP+A DVD VA+ T G VGA+L N++ AA+ R + EI D+ + G + R+ VA +EA A+V + + + VT+ PR GR GY+ Sbjct: 349 LLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTVVPR-GRIGGYM 488
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17 Identity = 66/205 (32.20%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ----VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFD ++ +P+P + GR EILK + K VD +A T G GAEL N+V AA+ DG+ +T +L + +++ ++ + RS E + A +E+ A++A D I TI PR G LG+V + ++ ++ E +R LL + V + R A+EL G ++T + DNA A+ V Sbjct: 434 LIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFS---KDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPR-GPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMV 631
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17 Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKK--PMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAVNFPDL----KNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L RPGRFDR + + P +GR ILKVH KK P+ DDV+ ++ASMT G GA+LAN+V AA+ R + + D + A + G+ + R + + VA +EA AVV L +E ++I PR+G LG+ + H +L L + L RAA+E+ G++ST Sbjct: 485 LRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHE--DRYLLFIDELHGRLVTLLGGRAAEEV-VYSGRIST 672 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |