FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.316e-17 Identity = 68/207 (32.85%), Postives = 104/207 (50.24%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER----SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG--YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR++ + P + GR +ILKVH RK P++ DVD + +A T G GA+LAN+V AA+ R + ++ +L+ + +++ M+ + R S A +EA ++ PD VTI PR GR LG + + D + +SRQ L I+ R A+E+ G +ST A S A+ V Sbjct: 307 LLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVS---MLEFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPR-GRALGVTFFLPESDTLS-----ISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMV 504
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17 Identity = 68/208 (32.69%), Postives = 106/208 (50.96%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---PETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR++ + P + GR +ILKVH R+ P+A D+D +A T G GA+LAN+V AA+ R + ++ +++ + +++ M+ + RS E ++ A +EA A++ P+ + VTI PR GR LG EG SRQ L I+ R A+E+ G +ST + A + AR V Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVS---MVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPR-GRALGVT------FFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMV 504
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17 Identity = 68/208 (32.69%), Postives = 106/208 (50.96%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---PETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR++ + P + GR +ILKVH R+ P+A D+D +A T G GA+LAN+V AA+ R + ++ +++ + +++ M+ + RS E ++ A +EA A++ P+ + VTI PR GR LG EG SRQ L I+ R A+E+ G +ST + A + AR V Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVS---MVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPR-GRALGVT------FFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMV 504
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.614e-17 Identity = 68/222 (30.63%), Postives = 109/222 (49.10%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSP--ETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV-LGGLSDXHFGLSNFWVAD 658 L+RPGRFD ++ +PKP L GR++I + K + +D +A + G GA++ N+V AA+ D E+T L +A G R P E R A +EA +V++ D + VTI PR G+ LG+ M + ++ L++ +L + V + R A+EL G+ +++T A+ A A V + G+SD GL +F D Sbjct: 354 LLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPR-GQSLGHTAMLPEKDSYQ---LTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSD-KVGLRDFTAQD 570
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQS-LLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR I I P + R ILKVHA K ++ + L VA T G GA+L N++ A + +RD RT I +D+ +A G +K R S E + VA +EA A+V ++ ++ +TI PR G+ GY + K + L R+S LL I + RAA+E G +++T + A + AR V Sbjct: 386 LLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPA-KKSRVISDEDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPR-GQAGGYT---LSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMV 584
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 68/208 (32.69%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG--YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR+IF+ P + GR +I++VH +K P+ ++VD + +A T G GA+LAN+V AA+ R+ R + D A E R M+ +++ T A +EA +V P+ VTI PR GR LG + K D + + L Q I+ R A+E+ G +ST A + AR V Sbjct: 307 LLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQKEST----AYHEAGHVIVGRLVPEHDPAHKVTIIPR-GRALGVTFFLPKDDVLSINKNKLESQ-----ISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARNMV 504
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 71/217 (32.72%), Postives = 104/217 (47.93%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRT-------EITTDDLLQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG--YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSD 622 L+RPGRFDR++ + P + GR +ILKVH RK P+++DVD + +A T G GA+LAN+V AA+ R E D ++ ++ M D ++ S A +EA ++ PD VTI PR G+ LG + + D + +SRQ L I+ R A+E+ G +ST A + AR V G SD Sbjct: 307 LLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKES------TAYHEAGHVIIGRLVPDHDPAHKVTIIPR-GQALGITFFLPESDILS-----ISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSD 511
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 73/214 (34.11%), Postives = 104/214 (48.60%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT---DDLLQ--AAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 622 L+RPGRFDR++ + P + GR +ILKVHA K +DV +A T G GA+LAN++ AAI R RT I++ DD + A +E M D K +S VA +E AV P ++ VT+ PR R L + D ++S+Q L I L RAA+E+ G+ +++T AR V G+SD Sbjct: 382 LLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGTVMTDGKSKS-----LVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGLTWFIPSDD-----PTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSD 585
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.640e-16 Identity = 62/207 (29.95%), Postives = 101/207 (48.79%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDL-----LQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR++ + P GR+ IL+VHA+ K M V +A T G GA+LAN++ AAI R ++ +T ++ A +E ++D K + R +A +E A++ ++ VT+ PR R L + D + ++SR +L I L RAA+E+ G+ +++T + S AR V Sbjct: 328 LLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKSK-----RLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDD-----QSLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMV 524
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16 Identity = 56/184 (30.43%), Postives = 94/184 (51.09%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPGRFDR++ + P + GR IL +HA+ K + ++V A+A T G GA+LAN++ AAI R + IT ++ A GM ++ R +A +E A++ P +E VT+ PR G+ G D + +++R ++ I L R A+E+ G+ +++T Sbjct: 366 LLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKRLIAYHEVGHALIGTLCPGHDPVEKVTLIPR-GQAQGLTWFTPDE---DQSLMTRNQMIARIAGLLGGRVAEEVIFGDDEVTT 545 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |