FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.797e-16 Identity = 60/202 (29.70%), Postives = 97/202 (48.02%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR++ + P GR+ IL+VHA+ K M V +A T G GA+LAN++ AAI R + +T ++ + GM ++ R +A +E A++ ++ VT+ PR R L + D + ++SR +L I L RAA+E+ G+ +++T + S AR V Sbjct: 328 LLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSEIDTSIDRVVAGMEGTPLIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDD-----QSLISRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMV 524
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRK 283 ++RPGRFDR I +P P L GR+EIL +H RK MA DVD A+A +T+G GA+L +V A N +R G IT DD+++A + + + LD++ Sbjct: 295 VLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVE-KVKAALDKR 387
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 67/203 (33.00%), Postives = 103/203 (50.74%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQS-LLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR I I P + R IL+VHA+ K ++ + L VA T G GA+L N++ A + +RD RT I +D+ +A G + + R+ VA +EA A+V ++ ++ +TI PR G+ GY + K + L R+S LL I + RAA+E G +++T + A + AR V Sbjct: 383 LLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKSRVVSDADRKLVAYHEAGHALVGLHVHSNDEVQKITIIPR-GQAGGYT---LSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMV 581
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 65/190 (34.21%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT---DDLLQ--AAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLST 553 L+RPGRFDR++ + P + GR +ILKVH+ K V +A T G GA+LAN++ AAI R G+T I++ DD + A +E M D K +S VA +E A+ P ++ VT+ PR R L + D ++S+Q L I L RAA+E+ GE +++T Sbjct: 375 LLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKS-----LVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGLTWFIPSDD-----PTLISKQQLFARIVGGLGGRAAEEVIFGESEVTT 554
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.063e-15 Identity = 62/203 (30.54%), Postives = 103/203 (50.74%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 604 L+RPGRFDR I + P + R EILK+H++ K ++ ++ + +A T G GA+L N++ A++ +R+ +T++ + A +K R S E + VA +EA AVV + ++ +TI PR G GY M + K+ S++ LL I + RAA+ + G+ +ST ++ A AR V Sbjct: 367 LLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVRE-KTDVIISTQIDEAIDRVMAGPAKKSRVISQEELKAVAYHEAGHAVVGLKVKGGNKVQKITIIPR-GNAGGYNLMTPEEEKYN---ASKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMV 564
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.813e-15 Identity = 68/213 (31.92%), Postives = 104/213 (48.83%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 622 L+RPGRFDR+I + P + GR +IL+VH +K + + +A T G GAELAN+V A + R + E+ DL +A +E R M+ S E + A +E A+V + I TI PR GR LG V ++ +F + R + I V +A R A+E+ G+ ++++ + A A+ V GLSD Sbjct: 310 LLRPGRFDRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAARRNKKEVEMHDLEEAKDKVMMGVERRSMI----MSDEQKKLTAYHEGGHALVGLYCLASDPIHKATIIPR-GRALGMVMRLPENDRFS---MPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDIKMATRMAKAMVTDWGLSD 514
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15 Identity = 72/215 (33.49%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT---DDLLQ--AAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKE--GMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 622 L+RPGRFDR++ + P + GR EIL VH K + V VA T G GA+LAN++ AAI R G+ IT DD + A +E M D K + VA +E AV A ++ VT+ PR G R + +E ++SRQ + I L RAA+E+ GE +++T A AR V G+S+ Sbjct: 377 LLRPGRFDRRVSVGLPDVRGREEILLVHGANKRLDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGRRGKDRITVSEIDDSIDRIVAGLEGTSMTDGKSK-----MLVAYHEIGHAVCATLTAGHDEVQKVTLIPR-----GQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGDLQQVTRVARRMVTAFGMSE 581
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-IEERGMLDRKE 286 ++RPGRFDR I +P P GR+EILK+H RK +A+DV+ +A MT+G VGAEL I A +N +R+ R +T DD +A + I E+ + KE Sbjct: 326 ILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKVKE 421
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15 Identity = 64/184 (34.78%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 535 L+RPGRFDR+IFI P + GR I KVH R K A + D LA +AS+T G GA++AN+ AA+ R I QA + G L++K + PE + VA +EA AV + V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G Sbjct: 462 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 639
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14 Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 535 L+RPGRFDR+IFI P + GR I KVH R K + D LA +AS+T G GA++AN+ AA+ R I QA + G L++K + PE + VA +EA AV + V+I PR G+ LGY + ++ ++ + +++ LLD + + L R ++E++ G Sbjct: 463 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPR-GKGLGYAQ----YLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFG 640 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |