FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHAR--KKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 535 L+RPGRFDR+IFI P + GR I KVH R K + + LA +AS+T G GA++AN+ AA+ R I QA + G L++K + PE + VA +EA AV + V+I PR G+ LGY + ++ ++ + +R+ LLD + + L R ++E++ G Sbjct: 464 LMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIE-RVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPR-GKGLGYAQ----YLPREQYLYTREQLLDRMCMTLGGRVSEEIFFG 641
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.420e-14 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 253 L+RPGR DRKI IP P +GRMEILK+H K ++DY A+ +TDG GA+L N+V A +++ R + DL+ AA+ Sbjct: 288 LLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAAR 371
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 55/182 (30.22%), Postives = 98/182 (53.85%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 535 L+RPGRFDR+I I KP + GR +I +++ +K + ++ + + +A++T G GA++AN+ AA+ R T+IT ++A G L++K + S R VA +E+ AV + + VTI PR LG+ + ++ + +++++ L D + L RAA+E+ G Sbjct: 491 LLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQH-FESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEEVLIG 667
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14 Identity = 60/179 (33.52%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYL--AVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 526 L+RPGRFDR I I KP L GR I VH +A ++ L +A++T G GA++AN+ AA+ R + + QA + G ++RK + SPE + VA +EA AV + V+I PR LGY + ++ +L+ Q L D +T+ L R ++EL Sbjct: 504 LLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIE-RVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQ----YLPGDIFLLTEQQLKDRMTMSLGGRVSEEL 677
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 56/183 (30.60%), Postives = 97/183 (53.01%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 538 L+RPGRFDR+I I KP + GR +I K++ +K + + Y + +A++T G GA++AN+ AA+ R +T ++A G L++K R S R VA +E+ AVV + + VTI PR LG+ + ++ + +++++ L D + L RAA+++ G+ Sbjct: 477 LLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAH-FESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGK 654
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 57/201 (28.36%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR-KERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 595 L+RPGR DR +FI P L R EI + H + + + + +A +T G GA++ANI AA++ R+G T + T + A + G + K S E R VA +E+ A+V + + V+IAPR LG+ +M + + + +++ L + + + L RAA+ + S + + D+ R R Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQM----LPRDQYLFTKEQLFERMCMALGGRAAEAI-----SFSRVTSGAQDDLRKVTR 656
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKK--PMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQ-VAINEAAMAV----VAVNFPDLKNIEFVTIAPRAGRELGY 418 L RPGRFDR + + P GR ILKVH +K P+ DVD +A+MT G GA+LAN+V AA+ R + + D + A + G+ + + + VA +E AV VA P +E ++I PR+G LG+ Sbjct: 502 LRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGF 647
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13 Identity = 55/183 (30.05%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 538 L+RPGRFDR+I I KP + GR +I +++ +K + + + + +A++T G GA++AN+ AA+ R T IT ++A G L++K + S R VA +E+ AV + + VTI PR LG+ + ++ +++++ L D + L RAA+E+ G+ Sbjct: 476 LLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQH-FESAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQ----YVPNDNLLMTKEQLFDMTCMTLGGRAAEEVLIGK 653
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 51/178 (28.65%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDR-KERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 526 L+RPGR DR +FI P L R EI + H + + + + +A +T G GA++ANI AA++ R+G T + T + A + G + K S E + VA +E+ A+V + + V+I PR LG+ +M + + + +++ L + + + L RA++ L Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQM----LPRDQHLFTKEQLFERMCMALGGRASEAL 638
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 57/185 (30.81%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHAR----KKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 538 L RPGRFDR+I+I P + GR I KVH R ++ D +A++T G GA+++N+ AA+ R + QA + G L++K + P VA +EA AVV + V+I PR G+ LGY + ++ ++ + +R+ L D + + L R A++L+ G+ Sbjct: 455 LTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIE-RVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPR-GKGLGYAQ----YLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQ 633 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |