FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPE 298 L+RPGRFDR I IP P GR EI K+H R +A+DVD +A +T+G GA++ I A + +R+ R +T DD L+A +R M ++E S E Sbjct: 335 LLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAV---DRVMGKKEEESGE 430
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12 Identity = 61/215 (28.37%), Postives = 102/215 (47.44%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEI-------TTDDLLQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSD 622 L RPGRFD+ + + P + GR +ILK H +K +AD+VD +A T G+ GAELAN+V AA+ + + D +L A+ + + D ++ A +EA A++A + TI PR GR LG + ++ M + ++++ + V + + A+EL G+ ++ +A AR V G+SD Sbjct: 433 LTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARKA------TAFHEAGHAIMAKYTNGATPLYKATILPR-GRALG-ITFQLPEMDKVD--ITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSD 637
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 247 L+RPGRFDR I +P P GR+EILKVH RK + VD +A +T+G GA+L I A + +RD RT +T DD L+A Sbjct: 294 LLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKA 374
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 247 L+RPGRFDR I +P P GR+EILKVH R+ + VD A+A MT+G GA+L I A + +R+ RT +T +D L+A Sbjct: 296 LLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKA 376
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 247 L+RPGRFDR I +P P GR+EILKVH RK + +VD +A +T+G GA+L I A + +RD RT +T +D L+A Sbjct: 294 LLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKA 374
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +T+G GA++ N+ AA +RDGR ++T +DL++A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRNKMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 253 L+RPGR DRK+ IP P GR+EI K+H K + D+ A M+DG GA++ N A +RD R I DDL++A + Sbjct: 337 LLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVR 420
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12 Identity = 54/182 (29.67%), Postives = 94/182 (51.65%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLA--VASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SPETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 535 L+RPGRFDR+I I KP + GR +I +++ +K + + Y + +A++T G GA++AN+ AA+ R +T +A G L++K R S R VA +E+ AV + + VTI PR LG+ + ++ + +++++ L D + L RAA+++ G Sbjct: 483 LLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAH-FDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQ----YVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIG 659
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQVAINEAAMAVVAVNFPDLK 367 L RPGRFDR+I I P GR EIL++H RK P+A+DVD +A +T+G VGA+L + + AA++ +R EI + A++ E + R++ I +AM V V P++K Sbjct: 335 LRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKN---IEPSAMREVLVEVPNVK 453
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12 Identity = 32/84 (38.10%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 253 ++RPGRFDR + +P PG+ R +ILK+H K +A D+D+ +A +T+GM GA+L I A + +R + + +D L+A + Sbjct: 315 ILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVE 398 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |