FC931862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12 Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPETWRQVA--INEAAMAVVAVNFPDLK 367 L RPGRFDR+I I P GR EIL++H R P+A+DVD +A +T G VGA+LA + + AA+ +R I L+A +I + +LD + + + +++ + +AM V V P++K Sbjct: 332 LRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSID----LEAEEIPKE-VLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVK 450
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 247 L+RPGRFDR I +P P GR+EILKVH R+ + +VD +A +T+G GA+L I A + +R+ RT +T +D L+A Sbjct: 296 LLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKA 376
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSPET 301 L+RPGRFDR I +P P GR EILK+H +A++VD +A +TDG GA+L I A + +RD R E+T D + A + G+ +E ET Sbjct: 307 LLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVD-KIMGVEKEEEYKQET 405
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +++G GA++ N+ AA +RDGR ++T DL+ A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +++G GA++ N+ AA +RDGR ++T DL+ A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKINVKRNNMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +++G GA++ N+ AA +RDGR ++T DL+ A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +++G GA++ N+ AA +RDGR ++T DL+ A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +++G GA++ N+ AA +RDGR ++T DL+ A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA---AQIEERGMLDRKER 289 L+RPGRFDR I +P P GR EI ++ +K + D+++ ++ +++G GA++ N+ AA +RDGR ++T DL+ A ++ M KER Sbjct: 290 LLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKER 388
BLAST of FC931862 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 31/84 (36.90%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 2 LVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQ 253 ++RPGRFDR + +P PG+ R +ILK+H K +A+D+D+ +A T+GM GA+L I A + +R + + ++ L+A + Sbjct: 315 ILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVE 398 The following BLAST results are available for this feature:
BLAST of FC931862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931862 ID=FC931862; Name=FC931862; organism=Citrus clementina; type=EST; length=676bpback to top |