FC931883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_HAEI8 (Malate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=mdh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.162e-27 Identity = 73/117 (62.39%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+KL P + LALYDIA TPGVA DV HI T V G+ G D ALE +DVV+I AGV KPGM R DLFNINAGIV+ L +A CP A V +I Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGTDLALYDIAPVTPGVAVDVSHIPTAVNVKGFSGEDPT-PALEGADVVLISAGVARKPGMDRSDLFNINAGIVRGLIEKVAITCPKACVGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_CITK8 (Malate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.162e-27 Identity = 71/117 (60.68%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV KPGM R DLFN+NAGIVK+L IA CP A V +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIATTCPKACVGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_ACTSZ (Malate dehydrogenase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mdh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.162e-27 Identity = 66/117 (56.41%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KV +LGA+GGIGQPL+LL+KL+ P S L+LYD+A TPGVA D+ HI T EV G+ G+D +AL+ +D+V+I AGV KPGMTR DLFN+NAGI+++L +A+ CP A V +I Sbjct: 2 KVTLLGASGGIGQPLSLLLKLHLPAESDLSLYDVAPVTPGVAKDISHIPTSVEVEGFGGDDP-SEALKGADIVLICAGVARKPGMTRADLFNVNAGIIQNLVEKVAQVCPQACVCII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_SHEON (Malate dehydrogenase OS=Shewanella oneidensis GN=mdh PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.518e-27 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA TPGVA D+ HI T E+ G+ G D AL +DVV+I AGV KPGM R DLFNINAGIV++L +A CP A+V +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPT-PALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_SHEHH (Malate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.518e-27 Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA PGVA D+ HI T EV G+ G D ALE +DVV+I AGV KPGM R DLFNINAGIV++L A CP A++ +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVIPGVAVDLSHIPTAVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_ESCF3 (Malate dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.518e-27 Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV KPGM R DLFN+NAGIVK+L IA CP A + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFAGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIATTCPKACIGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_ECOLU (Malate dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.518e-27 Identity = 69/117 (58.97%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE ++VV+I AGV KPGM R DLFN+NAGIVK+L +AK CP A + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGANVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_VIBCH (Malate dehydrogenase OS=Vibrio cholerae GN=mdh PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.982e-27 Identity = 72/117 (61.54%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV++ AGV KPGM R DLFN+NAGIVK L IA CP A V +I Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVTIKGYAGEDPT-PALEGADVVLVSAGVARKPGMDRADLFNVNAGIVKALAEKIAVVCPKACVGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_SHESR (Malate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.982e-27 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA TPGVA D+ HI T E+ G+ G D AL +DVV+I AGV KPGM R DLFNINAGIV++L +A CP A+V +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPT-PALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_SHESM (Malate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.982e-27 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA TPGVA D+ HI T E+ G+ G D AL +DVV+I AGV KPGM R DLFNINAGIV++L +A CP A+V +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSQLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPT-PALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGII 117 The following BLAST results are available for this feature:
BLAST of FC931883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931883 ID=FC931883; Name=FC931883; organism=Citrus clementina; type=EST; length=516bpback to top |