FC931883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 161 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 P KVA+LGAAGGIGQ L+LLMK+NPLVS L LYD+ N PGV ADV H++T + V G++G QL AL D+VIIPAG+P KPGMTRDDLF INAGIVK LC +AK CPNAIVN+I Sbjct: 41 PGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 158
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.569e-39 Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 17 SFNGLFIIISLPASLKFKPATKMRSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 SF GL + S A +R SV ++ + KP G + +S KVAVLGAAGGIGQPL+LL+K++PLVS L LYDIAN GVAAD+ H NT S+V + G +L L+D +VV+IPAGVP KPGMTRDDLFNINA IVK L A+A+ CPNA +++I Sbjct: 38 SFTGLKSTSLISGSDSSSLAKTLRGSVTKAQTSDKKPYGFKINASY-----KVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHII 198
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.911e-38 Identity = 82/139 (58.99%), Postives = 106/139 (76.26%), Query Frame = 2 Query: 107 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 + LA+PA A R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI T++ V GY+G +QL L+ DVV+IPAGVP KPGMTRDDLFN NA IV L +A A++ P A++ +I Sbjct: 2 LSALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLAAACAQHRPEAMICII 140
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.605e-37 Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 110 KTLAKPAGARGYSSESVPDR----KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KTL + A G + SV KVA+LGAAGGIGQPL LL+K +PLV+ LALYD+ NTPGVAAD+ HI++ ++V + G +L A+E++DV++IPAGVP KPGMTRDDLFN NAGIV+DL + IAK P A++ +I Sbjct: 6 KTLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAII 144
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.755e-35 Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 2 Query: 113 TLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ-LGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNA 499 T K R +S+ S KVAVLGA GGIGQPL++L+KLN VS LAL+DI PGVAAD+GHINT S V GY +D+ L +AL +DVVIIPAGVP KPGMTRDDLF NA IV+DL A + CP A Sbjct: 11 TPLKSIAPRSFSTTSSRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEA 140
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.016e-31 Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 KVA+LGA+GG+GQPL+LL+KL+P VS LALYDI G+ D+ HINT S GY D + L ++ VV+IPAGVP KPG+TRDDLF +NAGIVK L +A+ K+ PNA + +I Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKSLVTAVGKFAPNARILVI 116
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 6.584e-31 Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 2 Query: 137 RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN--DQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 R +SS KV VLGA GGIGQPL+LL+KLN V+ L LYD+ GVA D+ HI T S V G+ D L AL+D+D+V+IPAGVP KPGMTRDDLF INA IV+DL +A A+ PNA + +I Sbjct: 8 RAFSSTVANPYKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVRDLAAATAESAPNAAILVI 135
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.502e-30 Identity = 74/117 (63.25%), Postives = 87/117 (74.36%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 K+AVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T ++ G+ G D + ALE++DVV+I AGV KPGM R DLFNINAGIVK+L +AK CP A V +I Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPI-PALENADVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGII 117
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.268e-30 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 188 AAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 A+GGIG+PL+LL+K +PL+S+LALYDIA+ GVAAD+ HI T++ V ++G +L + L ++VVIIPAG+P KPGMTRDDLFN NA IV +L + AK CP A++ +I Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNASIVAELIDSCAKNCPKAMICII 109
BLAST of FC931883 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.574e-30 Identity = 74/117 (63.25%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 170 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPGKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 514 K+AVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T ++ G+ G D ALE++DVV+I AGV KPGM R DLFNINAGIVK+L +AK CP A V +I Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPT-PALENADVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGII 117 The following BLAST results are available for this feature:
BLAST of FC931883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931883 ID=FC931883; Name=FC931883; organism=Citrus clementina; type=EST; length=516bpback to top |